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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM55682.1
DDBJ      :             ribonuclease Z
Swiss-Prot:RNZ_HALLT    RecName: Full=Ribonuclease Z;         Short=RNase Z;         EC=3.1.26.11;AltName: Full=tRNase Z;AltName: Full=tRNA 3 endonuclease;

Homologs  Archaea  68/68 : Bacteria  371/915 : Eukaryota  127/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:310 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->296 2cbnA PDBj 9e-46 34.0 %
:RPS:PDB   2->303 2cbnA PDBj 2e-34 31.6 %
:RPS:SCOP  5->304 1y44A1  d.157.1.7 * 2e-57 33.1 %
:HMM:SCOP  3->304 1y44A1 d.157.1.7 * 4.2e-90 38.9 %
:RPS:PFM   22->87 PF00753 * Lactamase_B 9e-05 33.3 %
:HMM:PFM   22->239 PF00753 * Lactamase_B 2.6e-13 20.3 148/194  
:HMM:PFM   223->278 PF04321 * RmlD_sub_bind 0.00038 26.8 56/287  
:BLT:SWISS 1->310 RNZ_HALLT 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM55682.1 GT:GENE ACM55682.1 GT:PRODUCT ribonuclease Z GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(80775..81707) GB:FROM 80775 GB:TO 81707 GB:DIRECTION - GB:PRODUCT ribonuclease Z GB:NOTE TIGRFAM: ribonuclease Z; PFAM: beta-lactamase domain protein; KEGG: nph:NP2254A hypothetical protein GB:PROTEIN_ID ACM55682.1 GB:DB_XREF GI:222451417 InterPro:IPR001279 InterPro:IPR013471 LENGTH 310 SQ:AASEQ MSLRVTFLGTGGAVPTTERAPSALFVNREGDRLLFDCGEGTQRGMMRFGTGFGIDHLFVSHLHGDHVLGIPGLVQTLGFNDRAEPLTIHCPPGTEDDLHDLVHAVGHDPAFQIRIESVAPGEVALDADGYEVRAFETVHRTKSQGYVLEEDDRPGRFDRPKAEELGVPVGPKFGRLHEGEPVEAEDGSIVEPDQVVGPPRPGRKFVYTADTRPREGTVAVAEDADLLVHDATFADDMEDRARDTAHSTGREAGSVAERAGAKRLALVHISSRYAADASPIRREAREAFDGECLLPDDGDLIEVPFPDADE GT:EXON 1|1-310:0| SW:ID RNZ_HALLT SW:DE RecName: Full=Ribonuclease Z; Short=RNase Z; EC=3.1.26.11;AltName: Full=tRNase Z;AltName: Full=tRNA 3 endonuclease; SW:GN Name=rnz; OrderedLocusNames=Hlac_0076; SW:KW Complete proteome; Endonuclease; Hydrolase; Metal-binding; Nuclease;tRNA processing; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->310|RNZ_HALLT|0.0|100.0|310/310| GO:SWS:NREP 5 GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 2->296|2cbnA|9e-46|34.0|294/306| RP:PDB:NREP 1 RP:PDB:REP 2->303|2cbnA|2e-34|31.6|301/306| RP:PFM:NREP 1 RP:PFM:REP 22->87|PF00753|9e-05|33.3|66/171|Lactamase_B| HM:PFM:NREP 2 HM:PFM:REP 22->239|PF00753|2.6e-13|20.3|148/194|Lactamase_B| HM:PFM:REP 223->278|PF04321|0.00038|26.8|56/287|RmlD_sub_bind| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00753|IPR001279| RP:SCP:NREP 1 RP:SCP:REP 5->304|1y44A1|2e-57|33.1|260/269|d.157.1.7| HM:SCP:REP 3->304|1y44A1|4.2e-90|38.9|301/0|d.157.1.7|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 703 OP:NHOMOORG 566 OP:PATTERN 11111211111111111112111111113211111111111111111112211111111111111111 --1-1------------11-1----1--1-1-21111----1-11-1------11-----11---1-1211-----------------11111111---11111111-11111111111111111------------11------11111111111111111111111111111111111111--------111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111-111111111----11-------------------2------------111-----11-------------------2---------1-------------------------------------1---------------------------------------------------------------------------------11-------------------------2-2-----------111-111--21121--1------------------------1--1---1---2----------------------------------11-1-111111111111-11-1111111111111111111----11111111111111111-1111111-----------------------------1-----------------111111--11------1----11111---------------------------------------------------1111111111---------------------------1------1---- 1----12-1-----2----1111111-111111----------11111---111-----111------------------------22-142-122-111-1-12112-111132111112221422226K2-2232222212331121241142-12212---21---1112111212E321223323-412234213 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 303 STR:RPRED 97.7 SQ:SECSTR TccEEEEEEcccccccccccccEccccccccEEEEcccTTHHHHHHTcccTTTEEEEEcccccHHHHTTHHHHHHHHHHTTccccEEEEEcTTHHHHHHHHHHHTTccccccEEEEEcccEEEEEEcccEEEEEEEcccccccEEEEEEEccccccccHHHHHHTTccccHHHHHHHHTcccEETTTEEccGGGTccccccccEEEEccccccccTHHHHHTTccEEEEEccccGGGHHHHHHTTcccHHHHHHHHHHHTccEEEEEcccTTccHHHHHHHHHHHHTTcccEEEccTTcEEEc####### PSIPRED ccEEEEEEEcccccccccccccEEEEEEccEEEEEEccccHHHHHHHccccccccEEEEEcccHHHHccHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEcccccEEEEcccEEEEEEEcccccccccEEEEEccccccccHHHHHHccccccHHHHHHccccEEEEcccEEEcHHHEEcccccccEEEEEccccccHHHHHHHccccEEEEEcccccHHHHHHHccccccHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHccccEEEcccccEEEEEcccccc //