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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM56276.1
DDBJ      :             extracellular solute-binding protein family 5
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:646 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   373->626 1zlqB PDBj 1e-09 26.7 %
:RPS:PDB   97->312,326->645 3dp8B PDBj 4e-28 19.2 %
:RPS:SCOP  121->312,321->644 1uqwA  c.94.1.1 * 1e-30 18.5 %
:HMM:SCOP  97->314 1xocA1 c.94.1.1 * 5.7e-15 20.2 %
:HMM:SCOP  320->644 1jetA_ c.94.1.1 * 4.1e-37 25.3 %
:RPS:PFM   373->629 PF00496 * SBP_bac_5 2e-08 28.2 %
:HMM:PFM   93->191 PF00496 * SBP_bac_5 2.3e-08 24.2 91/372  
:HMM:PFM   373->643 PF00496 * SBP_bac_5 1.3e-37 25.7 241/372  
:HMM:PFM   29->70 PF01391 * Collagen 0.00016 33.3 42/60  
:BLT:SWISS 373->626 NIKA_ECOLI 4e-09 26.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM56276.1 GT:GENE ACM56276.1 GT:PRODUCT extracellular solute-binding protein family 5 GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION 690468..692408 GB:FROM 690468 GB:TO 692408 GB:DIRECTION + GB:PRODUCT extracellular solute-binding protein family 5 GB:NOTE PFAM: extracellular solute-binding protein family 5; KEGG: hsl:OE4311F dipeptide/oligopeptide/nickel ABC transporter periplasmic substrate-binding protein GB:PROTEIN_ID ACM56276.1 GB:DB_XREF GI:222452011 InterPro:IPR000914 LENGTH 646 SQ:AASEQ MLRRHTDGTDDNSRHIGRRQWLSALGIAGVATLAGCSGNEGDGGDGSDGSDGGNGSDGSDGSDGSDGSDGGNSVEVGNFPQFGVDDLYGEEVARNLARQAFEQSEYDYSFDGGDLITPEGDQVEIDIYHSAGQETSQLTAEFIAQELGNNLGINVVVEAIDGTRFNNEYWTAEPQGGTDTVNGEDVEWANPTPQNPGPQSVTSNEPWDMSIVFGLNTYPLNPLTNEVFFDGPNSFYNPVGYYPEFDATGLFEEARQATSRDELRESFVEIFENLAQEQPYITLLFSDDLVGYNPDLNGPIENFSNGWDLPAWHFNDPSVSGSYDTVTSAGFTTLNPLYNTENGAGNAIARALDQGYTFDENQEYFPLLYDMSTEDGKVWTFEVRENLQFSEPYGQVTAEDFVYLIQELHQSEWANTAASASWDGVEVEQTGEFEFQATLETANLLWPETYDPLLYPIPRDLVEPYVEEEDVDGLEQDEELLELQFTGNLGAFTLDEWNRGSGTQYTRNDEYYLRDINEGPDLFSEGPLFEEASISVVEEQASRLGALETGEADSAAIPPEQFESYDEDENVTVRKIPTPYNMIISVNQRDNGWQSGPGNLFQITEFRQAVAAAVSKQQLIDGVYRGLASTHFTWQPRWSEFYPGDE GT:EXON 1|1-646:0| BL:SWS:NREP 1 BL:SWS:REP 373->626|NIKA_ECOLI|4e-09|26.7|221/524| SEG 37->78|sgnegdggdgsdgsdggngsdgsdgsdgsdgsdggnsvevgn| SEG 466->484|veeedvdgleqdeellelq| BL:PDB:NREP 1 BL:PDB:REP 373->626|1zlqB|1e-09|26.7|221/499| RP:PDB:NREP 1 RP:PDB:REP 97->312,326->645|3dp8B|4e-28|19.2|467/497| RP:PFM:NREP 1 RP:PFM:REP 373->629|PF00496|2e-08|28.2|227/366|SBP_bac_5| HM:PFM:NREP 3 HM:PFM:REP 93->191|PF00496|2.3e-08|24.2|91/372|SBP_bac_5| HM:PFM:REP 373->643|PF00496|1.3e-37|25.7|241/372|SBP_bac_5| HM:PFM:REP 29->70|PF01391|0.00016|33.3|42/60|Collagen| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 121->312,321->644|1uqwA|1e-30|18.5|454/487|c.94.1.1| HM:SCP:REP 97->314|1xocA1|5.7e-15|20.2|183/0|c.94.1.1|1/2|Periplasmic binding protein-like II| HM:SCP:REP 320->644|1jetA_|4.1e-37|25.3|292/0|c.94.1.1|2/2|Periplasmic binding protein-like II| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------11---1------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 551 STR:RPRED 85.3 SQ:SECSTR ##############################################################################################HHHHHHHHHTTccccTTcccccEETTEEcEEEEEEETTcHHHHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHHHHTccHTcccEEEEEcEEEEEcccTTTTTHHHHHHHHccHHGGGccccHHccTHHHHGGGcTTcHHHTTTcTTHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEcGGGccccccccTTcccGGGEEcccccccEEEEEEccccccccTTccTcHTccHHHHHHHcccEEEcTTccEEEccEEEcETTccEEEEEEccccccTTccccccHHHHHHHHHHHHTTGGGGTTcHHHHHEEEEEEccccEEEEEEccccTHHHHHTcccccccccGGGccccccTTcccccccccccHHHcccccccEEEEEEETTTEEEEEEcTTcccccGTcGGccHHccccccEEEEEEcccHHHHHHHHHTTcccTTcccHHHHHHHHTcTTcEEEEccccEEEEEEEcTTcTTHTHHHHHTTTcHHHHHHHHHHccHHHHHHTTTccccccccccccTTcTTcccc# PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHccEEEEEEEEEcccHHHHHHccccccccccccccHHHcccccccccccHHHcccccccEEEEEccccccccHHHccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccEEEEEHHHccccccccccccccccHHHcccccccccccccEEEEEccccccccccEEEcccHHHHHHHHHHHHHEEEcccccEEEEEEEEEcccccEEEEEEccccEEccccccccHHHHHHHHHHHHccccccccccccccEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccccccccccccEEEEEEEcccEEEEEEcccccccccccccccccccccEEEEEEEEEccHHHHHHHHHcccccEEEccHHHHHHHHHcccEEEEEEcccEEEEEEEEccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccc //