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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM56306.1
DDBJ      :             NADH-ubiquinone/plastoquinone oxidoreductase chain 3
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  345/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:138 amino acids
:PSIPRED
:RPS:PFM   16->83 PF00507 * Oxidored_q4 1e-10 38.2 %
:HMM:PFM   17->122 PF00507 * Oxidored_q4 1.1e-30 35.0 100/102  
:BLT:SWISS 2->83 NUOA_GEOTN 5e-21 43.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM56306.1 GT:GENE ACM56306.1 GT:PRODUCT NADH-ubiquinone/plastoquinone oxidoreductase chain 3 GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION 718685..719101 GB:FROM 718685 GB:TO 719101 GB:DIRECTION + GB:PRODUCT NADH-ubiquinone/plastoquinone oxidoreductase chain 3 GB:NOTE PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: hwa:HQ1637A NADH dehydrogenase, subunit A (ubiquinone) GB:PROTEIN_ID ACM56306.1 GB:DB_XREF GI:222452041 InterPro:IPR000440 LENGTH 138 SQ:AASEQ MSDWIAIGALAVVGLVIPLAMMSVSALLRPSVPETGKSTTYESGETPTGGTRIRFNIQYYMVALLFVVFDIETVLLFPWAVIYRPAISAGVPMIDLLWPMLAFVGVLAVGLVWAWRSGAISWARSPRATSRKTERDLN GT:EXON 1|1-138:0| BL:SWS:NREP 1 BL:SWS:REP 2->83|NUOA_GEOTN|5e-21|43.9|82/122| TM:NTM 3 TM:REGION 7->29| TM:REGION 59->81| TM:REGION 90->112| SEG 104->115|vgvlavglvwaw| RP:PFM:NREP 1 RP:PFM:REP 16->83|PF00507|1e-10|38.2|68/108|Oxidored_q4| HM:PFM:NREP 1 HM:PFM:REP 17->122|PF00507|1.1e-30|35.0|100/102|Oxidored_q4| GO:PFM:NREP 2 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00507|IPR000440| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00507|IPR000440| OP:NHOMO 383 OP:NHOMOORG 361 OP:PATTERN ------------------------11111111----------------11111--------------- 122-1----------11------------------------1---1--1--------------1---222------------1-----11--1--------11---2111---------------1111111112122211--111111111111111111111111111111111111111111-------1-111111111111111------1-1111----------11----------------------------------------------------------------------------------------------1-----------------------1--1-1111----11-------12-1111111111111111111111----------1-111111111111111122211111111111111111111--------111--111---111111-------1--------111111--1-1111111111111111111111111111111111111111---1111111111111211111111111111--------1------1111111--212212-11--1---------------------111-1--------------------------1---21-1---------------------------------------------------------------------------1----------------11111111111--1----------------1111111--11-11111-1111111-111---------1----------------111111111111111-----------------------------------------------------1-1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-2-2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc //