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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM56591.1
DDBJ      :             DNA gyrase, A subunit
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  910/915 : Eukaryota  184/199 : Viruses  9/175   --->[See Alignment]
b.68.10e.11.1
:827 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   41->493 3ilwB PDBj e-126 51.4 %
:BLT:PDB   507->814 1zi0B PDBj 2e-60 40.7 %
:RPS:PDB   41->490 1ab4A PDBj e-145 53.2 %
:RPS:PDB   494->610 3dwpB PDBj 5e-32 14.9 %
:RPS:PDB   707->814 3dwpC PDBj 4e-11 10.5 %
:RPS:SCOP  41->490 1ab4A  e.11.1.1 * e-146 53.2 %
:RPS:SCOP  505->814 1wp5A  b.68.10.1 * 4e-96 27.3 %
:HMM:SCOP  17->496 1bjtA_ e.11.1.1 * 1.9e-171 55.7 %
:HMM:SCOP  504->827 1wp5A_ b.68.10.1 * 1.9e-101 49.4 %
:RPS:PFM   42->469 PF00521 * DNA_topoisoIV e-134 60.9 %
:RPS:PFM   520->552 PF03989 * DNA_gyraseA_C 7e-04 51.5 %
:RPS:PFM   664->711 PF03989 * DNA_gyraseA_C 5e-04 37.5 %
:RPS:PFM   766->814 PF03989 * DNA_gyraseA_C 4e-04 38.8 %
:HMM:PFM   42->477 PF00521 * DNA_topoisoIV 1.1e-152 49.9 423/426  
:HMM:PFM   511->556 PF03989 * DNA_gyraseA_C 1.3e-12 30.4 46/50  
:HMM:PFM   558->609 PF03989 * DNA_gyraseA_C 1.2e-12 22.4 49/50  
:HMM:PFM   617->661 PF03989 * DNA_gyraseA_C 8.5e-13 26.7 45/50  
:HMM:PFM   663->710 PF03989 * DNA_gyraseA_C 3.1e-15 41.7 48/50  
:HMM:PFM   714->759 PF03989 * DNA_gyraseA_C 2.3e-11 26.7 45/50  
:HMM:PFM   765->813 PF03989 * DNA_gyraseA_C 3.9e-14 32.7 49/50  
:BLT:SWISS 17->809 GYRA_BACHD 0.0 49.1 %
:REPEAT 4|488->547|597->651|698->751|752->801
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM56591.1 GT:GENE ACM56591.1 GT:PRODUCT DNA gyrase, A subunit GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(984671..987154) GB:FROM 984671 GB:TO 987154 GB:DIRECTION - GB:PRODUCT DNA gyrase, A subunit GB:NOTE TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: hwa:HQ2651A DNA gyrase / DNA topoisomerase II subunit A GB:PROTEIN_ID ACM56591.1 GB:DB_XREF GI:222452326 InterPro:IPR002205 InterPro:IPR005743 InterPro:IPR006691 LENGTH 827 SQ:AASEQ MSSDVPDADPSDVGAAQVTNARIEDEMEQSYIDYAMSVIAGRALPDVRDGLKPVHRRILYAMHEAGVTSNSAHRKSSSVVGETMGDYHPHGDSAIYDTLARMAQDFSMRYPLVDGQGNFGSVDGDPPAAMRYTEARMSPIAEELLADIERDTVDFTSNYDDRLEEPEVLPAAFPNLLVNGSSGIAVGMSTNIPPHNLGEVIDATVALIKEPDCTVEDLMEHVKGPDFPTGANIVGRNAVHKAYKTGRGRVRVRAEFEVDEEEGRIVISELPFQQNKSRLVERIAEDVNDGSIEGIRDLRDESDRDGIRVVVELKRDAMAEVVKNQLLESHLERTFGVINLALVDGSPQVLDLKQTLEYYVEHRRDVVRRRSEHELAEREDRAHILKGRLKALEQVDDVVETIQNSDDRDAAKAALEADYEFSEAQAEHIVRMQLGSLTSMETQEIESEYEDVTARIERLETILGDPDELDQVIITELREIKDEYDDERRTSFIEDVGDVTHEDLIPEEECVVVMSEDDYIKRMSLDTFRAQNRGGKGIIGTDLKEGDRVSSVFAANSHDYLLVFTNHGQIYELKTYEIPEMSRTARGKSAVNLIDLDDGEEIEAVVNTDDLDDDEFLTMVTRDGYIKRTAVDQFGNIRSTGIRAIRLEDGDELVDVEVTNGGTDIVIGSRNGMAIRFAESEARAMGRTARGVIGIDLREGDAVAGVAAIDEDRHNWVLTVTENGYGKRSDLDEYRLQSRNGKGLIDIKTGDRNGEAVAIEAVTYGDHLLAMSDNGQIMRTRVEEISTVGRNTKGVIVMNLDPDDTVASVDIVSESVHGGETDVEGDE GT:EXON 1|1-827:0| BL:SWS:NREP 1 BL:SWS:REP 17->809|GYRA_BACHD|0.0|49.1|791/833| NREPEAT 1 REPEAT 4|488->547|597->651|698->751|752->801| SEG 2->16|ssdvpdadpsdvgaa| BL:PDB:NREP 2 BL:PDB:REP 41->493|3ilwB|e-126|51.4|453/463| BL:PDB:REP 507->814|1zi0B|2e-60|40.7|295/296| RP:PDB:NREP 3 RP:PDB:REP 41->490|1ab4A|e-145|53.2|442/477| RP:PDB:REP 494->610|3dwpB|5e-32|14.9|114/117| RP:PDB:REP 707->814|3dwpC|4e-11|10.5|107/120| RP:PFM:NREP 4 RP:PFM:REP 42->469|PF00521|e-134|60.9|427/434|DNA_topoisoIV| RP:PFM:REP 520->552|PF03989|7e-04|51.5|33/50|DNA_gyraseA_C| RP:PFM:REP 664->711|PF03989|5e-04|37.5|48/50|DNA_gyraseA_C| RP:PFM:REP 766->814|PF03989|4e-04|38.8|49/50|DNA_gyraseA_C| HM:PFM:NREP 7 HM:PFM:REP 42->477|PF00521|1.1e-152|49.9|423/426|DNA_topoisoIV| HM:PFM:REP 511->556|PF03989|1.3e-12|30.4|46/50|DNA_gyraseA_C| HM:PFM:REP 558->609|PF03989|1.2e-12|22.4|49/50|DNA_gyraseA_C| HM:PFM:REP 617->661|PF03989|8.5e-13|26.7|45/50|DNA_gyraseA_C| HM:PFM:REP 663->710|PF03989|3.1e-15|41.7|48/50|DNA_gyraseA_C| HM:PFM:REP 714->759|PF03989|2.3e-11|26.7|45/50|DNA_gyraseA_C| HM:PFM:REP 765->813|PF03989|3.9e-14|32.7|49/50|DNA_gyraseA_C| GO:PFM:NREP 20 GO:PFM GO:0003677|"GO:DNA binding"|PF00521|IPR002205| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00521|IPR002205| GO:PFM GO:0005524|"GO:ATP binding"|PF00521|IPR002205| GO:PFM GO:0005694|"GO:chromosome"|PF00521|IPR002205| GO:PFM GO:0006265|"GO:DNA topological change"|PF00521|IPR002205| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| RP:SCP:NREP 2 RP:SCP:REP 41->490|1ab4A|e-146|53.2|442/477|e.11.1.1| RP:SCP:REP 505->814|1wp5A|4e-96|27.3|304/323|b.68.10.1| HM:SCP:REP 17->496|1bjtA_|1.9e-171|55.7|456/760|e.11.1.1|1/1|Type II DNA topoisomerase| HM:SCP:REP 504->827|1wp5A_|1.9e-101|49.4|318/0|b.68.10.1|1/1|GyrA/ParC C-terminal domain-like| OP:NHOMO 1978 OP:NHOMOORG 1125 OP:PATTERN -----------------------111111111-----------1111111111--------111---- 1111211111111111112-12111211111122221111211122222222222222222222221222222222221111111111222212222112222222222222222222222222211111111111111111111122222222222222222222222222222222222221111111112222222222222222222222222222212222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222212122222222222221222222222111221122111121111111111112222222222222222222222222222222222-22223222222222222222222222222222222222222222222222222221111111111112222222222222111112222222222222222222222222222222232222222222222222222222221121222222222111222112121111111111111111111111122111111111111111111111111111222223222222222222222222222222221-2222211111122222222222222222-22222222222222222222222222222222222222222222222222221222222222222112222222222222222222222222112222222122222222222222222222222222222222222222222222222322222222222222222212222222222222221211112-22222222222222222231111111111122 221122114121112111111111111111111111111121111111111111111111111-1111-1111-1111111-111111-121111111-112111111222221314112122122-319I2-4262--12-223221-21113-422113912111-11-44113222F2233232131233443222 ---1---------------1---------------111-1----------------------------------------------------------------------------------------------------------------------------------111-- STR:NPRED 807 STR:RPRED 97.6 SQ:SECSTR #################cccccccccccTHHHHHHHHHHHTTTcccTTTcccHHHHHHHHHHHHTTcccccccEEHHHHHHHHHHHTccccHHHHHHHHHHTTcTTTcccccEEEEcccccTTccccccTTTcEEEEcTTHHHHcTTTTTTcccEEEcTTcccEEEccccccccHHHHHcEEEccccccEEEccccHHHHHHHHHHHHHcTTccHHHHTTTccccccccccEEcccHHHHHHHHHcEEEEEEEcEEEEEccTTEEEEEEccTTccHHHHHHHHHHHHTTTcccccccEEEccccccccEEEcccHHHHHHHHHHHHHHcTTEEEEEEEcEEEETTEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHcccHHHHHHHHccEEEccHHHHHHHHTccGGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccGGGcccEEEEccGGGHHHHHcTGGGEEEHHTTTcTTcEEEEEcccccGGGGGGcHHHHHHHcEEEEEETTTTGGGTccHHHHHHHHHHHHHHHHcHHHcEEEEcccccccHHHHTcccTTccccTTcccccccHcHHHHHHHHHHHHHHHHHHHHHHTccGGccHHHHHHHHHTcTTccccccTcccEEcccccHHHHHTTEcccccETTcTTccEEETTEEEEEccTGGGEEEccccEEEEEEEEEEEccccEEEcEEHEEEccTEcTTTcEEEETTEEEEEEEEEccccEEEEEEcccEEEEEEEEEEEcccccccTT### PSIPRED cccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEcccccEEEEEccccEEEccccccccccHHHHHHHHHHHHHcccccHHHHHccccccccccccEEEcHHHHHHHHHHcccEEEEEEEEEEEccccEEEEEEccccccHHHHHHHHHHHHHcccccccHHHHHHcccccEEEEEEccccccHHHHHHHHHcccccEEEEEEEEEEEccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccHHHHccccccHHHccccccEEEEEccccEEEEEEHHHccccccccccccccccccccEEEEEEEEEcccEEEEEEccccEEEEEHHHcccccccccccEEEEEcccccccEEEEEEEccccccccEEEEEEcccEEEEEEHHHHcccccccEEEEEEccccEEEEEEEcccccEEEEEEccccEEEEEHHHccccccccccEEEEEEccccEEEEEEEEccccccEEEEEEccccEEEEEHHHHcccccccccEEEEEcccccccEEEEEEEccccEEEEEEcccEEEEEEHHHcccccccccccEEEEEccccEEEEEEEEccccccccccccccc //