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DDBJ      :             XPG I domain protein
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  0/915 : Eukaryota  195/199 : Viruses  2/175   --->[See Alignment]

a.60.7c.120.1

:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->312 1rxvA PDBj 5e-45 36.5 %
:RPS:PDB   5->324 1b43A PDBj 1e-52 32.8 %
:RPS:SCOP  5->208 1a76A2  c.120.1.2 * 4e-33 33.5 %
:RPS:SCOP  211->312 1a76A1  a.60.7.1 * 2e-21 29.6 %
:HMM:SCOP  3->225 1mc8A2 c.120.1.2 * 2.8e-52 40.2 %
:HMM:SCOP  210->327 1b43A1 a.60.7.1 * 5.9e-23 31.9 %
:RPS:PFM   13->94 PF00752 * XPG_N 2e-05 31.6 %
:RPS:PFM   142->225 PF00867 * XPG_I 5e-17 50.0 %
:HMM:PFM   143->225 PF00867 * XPG_I 2.5e-26 45.8 83/92  
:HMM:PFM   6->103 PF00752 * XPG_N 3.8e-14 33.7 92/101  
:HMM:PFM   215->253 PF01367 * 5_3_exonuc 1e-05 43.6 39/101  
:BLT:SWISS 1->324 FEN_HALMA e-118 64.5 %
:COIL
:SEG

SeqInfo   AminoSeq     See neighboring genes

Links DAD                                                 Abbreviations  Back to title page

GT:ID          ACM57198.1
GT:GENE        ACM57198.1
GT:PRODUCT     XPG I domain protein
GT:DATABASE    GIB00862CH01
GT:ORG         hlac0
GB:ACCESSION   GIB00862CH01
GB:CHROMOSOME  1
GB:LOCATION    complement(1632802..1633779)
GB:FROM        1632802
GB:TO          1633779
GB:DIRECTION   -
GB:PRODUCT     XPG I domain protein
GB:NOTE        PFAM: XPG domain protein; XPG I domain protein; SMART: Helix-hairpin-helix domain protein class 2; KEGG: hwa:HQ2418A flap endonuclease-1
GB:PROTEIN_ID  ACM57198.1
GB:DB_XREF     GI:222452933   InterPro:IPR006084   InterPro:IPR006085   InterPro:IPR006086   InterPro:IPR008918
LENGTH         325
SQ:AASEQ       MGNADLRDLAAIRDISFAEIEGSVVAVDAHNWLYRYLTTTVKWTADETYTTTDGVEVANLIGIVQGLPKFFEHDLIPVMVFDGAVTELKADEVADRREKREQAEERRVAAKERGDAVEAARLEARTQRLTDTIQETTRELLRLLDVPIVEAPAEGEAQCAHMAATGTVDHAGSEDYDTLLFGAPTTLRQLTSKGDPELMDLAATLDDLGFDRQGLVDAAMLCGTDFNEGVRGIGPKTAVKAVREHGDLWGVLDARGVEIPNAEAIRELFMDPPATDVDVDTAVNPDVDAAREYVVDEWGVAADEVERGFERIAESQVQTGLDRWT
GT:EXON        1|1-325:0|
BL:SWS:NREP    1
BL:SWS:REP     1->324|FEN_HALMA|e-118|64.5|324/326|
COIL:NAA       30
COIL:NSEG      1
COIL:REGION    116->145|
SEG            96->113|rrekreqaeerrvaaker|
BL:PDB:NREP    1
BL:PDB:REP     5->312|1rxvA|5e-45|36.5|304/305|
RP:PDB:NREP    1
RP:PDB:REP     5->324|1b43A|1e-52|32.8|317/339|
RP:PFM:NREP    2
RP:PFM:REP     13->94|PF00752|2e-05|31.6|76/99|XPG_N|
RP:PFM:REP     142->225|PF00867|5e-17|50.0|84/88|XPG_I|
HM:PFM:NREP    3
HM:PFM:REP     143->225|PF00867|2.5e-26|45.8|83/92|XPG_I|
HM:PFM:REP     6->103|PF00752|3.8e-14|33.7|92/101|XPG_N|
HM:PFM:REP     215->253|PF01367|1e-05|43.6|39/101|5_3_exonuc|
GO:PFM:NREP    4
GO:PFM         GO:0004518|"GO:nuclease activity"|PF00752|IPR006085|
GO:PFM         GO:0006281|"GO:DNA repair"|PF00752|IPR006085|
GO:PFM         GO:0004518|"GO:nuclease activity"|PF00867|IPR006086|
GO:PFM         GO:0006281|"GO:DNA repair"|PF00867|IPR006086|
RP:SCP:NREP    2
RP:SCP:REP     5->208|1a76A2|4e-33|33.5|203/207|c.120.1.2|
RP:SCP:REP     211->312|1a76A1|2e-21|29.6|98/108|a.60.7.1|
HM:SCP:REP     3->225|1mc8A2|2.8e-52|40.2|219/219|c.120.1.2|1/1|PIN domain-like|
HM:SCP:REP     210->327|1b43A1|5.9e-23|31.9|116/0|a.60.7.1|1/1|5' to 3' exonuclease, C-terminal subdomain|
OP:NHOMO       623
OP:NHOMOORG    263
OP:PATTERN     11111111-1-111112111111111111111111111111111111111111111111111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 2133212-62112224534333233332232334433222222222324443332342433323323324223232213323333332-24453352213122423222356533222312132423425H3-323121211343343213-123643311424211421421322232H22223B4543441211113 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1--
STR:NPRED      321
STR:RPRED      98.8
SQ:SECSTR      ###cccGGGcccEEccGGGGTTcEEEEEHHHHHHHHHHHcccTTcccccccTTccccHHHHHHHHHHHHHHHTTcEEEEEEccccccccccccTTccccTTHHHHHHHHHHHHccHHHHHHHHHTcGGGTHHHHHHHHHHHHHHTccEEEccccHHHHHHHHHHHTcccEEEccccHHHHTTccEEEEcTTTcEccEEEEHHHHHHHHTccHHHHHHHHHHHccTTcTccTTccHHHHHHHHHTcccGGGGTGGccGccccHHHHHHHHHccccccccccccccccHHHHHHHHTTTTcccHHHHHHHHHHHHHHTTGGGcccc#
DISOP:02AL     325-326|
PSIPRED        cccccHHHHcccccccHHHHcccEEEEEcHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccccHHccHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHcccEEEEEcccEEEEEEcccEEEEcccccccEEEEcHHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHcccccccHHHHHHHHcccccccccHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccc
//