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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM57212.1
DDBJ      :             putative signal transduction protein with CBS domains
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.204.1d.37.1
:379 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   62->178 2p9mC PDBj 2e-08 33.0 %
:RPS:PDB   118->257 2d4zA PDBj 6e-12 15.9 %
:RPS:SCOP  68->175 2ef7A1  d.37.1.1 * 5e-15 26.9 %
:RPS:SCOP  265->361 1imuA  d.204.1.1 * 3e-05 20.2 %
:HMM:SCOP  2->60 1pbjA1 d.37.1.1 * 9.3e-05 20.3 %
:HMM:SCOP  58->115 1nf7A3 d.37.1.1 * 7.8e-08 36.2 %
:HMM:SCOP  118->181 1pvmA2 d.37.1.1 * 7.7e-13 43.8 %
:HMM:SCOP  192->277 2nycA1 d.37.1.1 * 8.8e-12 32.9 %
:HMM:SCOP  265->378 1imuA_ d.204.1.1 * 8.3e-06 28.0 %
:RPS:PFM   13->98 PF07934 * OGG_N 9e-04 27.8 %
:RPS:PFM   127->175 PF00571 * CBS 2e-06 40.8 %
:HMM:PFM   4->54 PF00571 * CBS 4.7e-09 23.5 51/57  
:HMM:PFM   65->116 PF00571 * CBS 3.4e-10 32.7 52/57  
:HMM:PFM   124->178 PF00571 * CBS 1.7e-15 41.8 55/57  
:HMM:PFM   202->257 PF00571 * CBS 1.7e-15 36.4 55/57  
:HMM:PFM   279->359 PF02482 * Ribosomal_S30AE 6.3e-07 28.8 73/94  
:BLT:SWISS 60->315 Y1404_METJA 2e-16 31.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM57212.1 GT:GENE ACM57212.1 GT:PRODUCT putative signal transduction protein with CBS domains GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION 1647244..1648383 GB:FROM 1647244 GB:TO 1648383 GB:DIRECTION + GB:PRODUCT putative signal transduction protein with CBS domains GB:NOTE PFAM: CBS domain containing protein; KEGG: hwa:HQ3172A CBS domain-containing protein GB:PROTEIN_ID ACM57212.1 GB:DB_XREF GI:222452947 InterPro:IPR000644 LENGTH 379 SQ:AASEQ MNIVDIAVPEYVEVDVSERLAKVRSIFERENPKGIIVTEDGEYAGVVGEKQLMRSRMEDDTKVSAVMKSAPSVDRHEDLRETARLLVEGDVKIAPVYEGEKLYGIVTVDQILEAVLDSLDAITVGQIATEDVIGINEKDTVGSAINRLRENGISRLPALDEDGHLVGVVTTNDIVEFVVRDQERQGSGDRAGDIDRMLDIPVYDIMSSPVVTATADETAEAVVERMFDNNVSGLVVTPKGADTIAGMVTKTDVLRALTFTEQDSMDVQITNVALLDTTSREHIVESIEQVASKYADMHVIHAHVRLHAHKEKLRGTPLIQCQIRLRTNEGQVGGSGEGYGAEHAFHVALDKLERNVLEIKGVNADEEYRGQLLRKLGEL GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 60->315|Y1404_METJA|2e-16|31.0|252/421| SEG 210->224|vvtatadetaeavve| SEG 329->342|egqvggsgegygae| BL:PDB:NREP 1 BL:PDB:REP 62->178|2p9mC|2e-08|33.0|115/125| RP:PDB:NREP 1 RP:PDB:REP 118->257|2d4zA|6e-12|15.9|138/169| RP:PFM:NREP 2 RP:PFM:REP 13->98|PF07934|9e-04|27.8|79/115|OGG_N| RP:PFM:REP 127->175|PF00571|2e-06|40.8|49/56|CBS| HM:PFM:NREP 5 HM:PFM:REP 4->54|PF00571|4.7e-09|23.5|51/57|CBS| HM:PFM:REP 65->116|PF00571|3.4e-10|32.7|52/57|CBS| HM:PFM:REP 124->178|PF00571|1.7e-15|41.8|55/57|CBS| HM:PFM:REP 202->257|PF00571|1.7e-15|36.4|55/57|CBS| HM:PFM:REP 279->359|PF02482|6.3e-07|28.8|73/94|Ribosomal_S30AE| GO:PFM:NREP 3 GO:PFM GO:0003684|"GO:damaged DNA binding"|PF07934|IPR012904| GO:PFM GO:0006289|"GO:nucleotide-excision repair"|PF07934|IPR012904| GO:PFM GO:0008534|"GO:oxidized purine base lesion DNA N-glycosylase activity"|PF07934|IPR012904| RP:SCP:NREP 2 RP:SCP:REP 68->175|2ef7A1|5e-15|26.9|108/127|d.37.1.1| RP:SCP:REP 265->361|1imuA|3e-05|20.2|89/107|d.204.1.1| HM:SCP:REP 2->60|1pbjA1|9.3e-05|20.3|59/59|d.37.1.1|1/4|CBS-domain| HM:SCP:REP 58->115|1nf7A3|7.8e-08|36.2|58/0|d.37.1.1|2/4|CBS-domain| HM:SCP:REP 118->181|1pvmA2|7.7e-13|43.8|64/78|d.37.1.1|3/4|CBS-domain| HM:SCP:REP 192->277|2nycA1|8.8e-12|32.9|85/0|d.37.1.1|4/4|CBS-domain| HM:SCP:REP 265->378|1imuA_|8.3e-06|28.0|107/107|d.204.1.1|1/1|Ribosome binding protein Y (YfiA homologue)| OP:NHOMO 104 OP:NHOMOORG 63 OP:PATTERN 11--12212222222221----12122111242-21221222212-1133222321111111211--1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------1----------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 68.6 SQ:SECSTR #####GccccccEEcccccHHHHHHHcccccTTcEEccTTccccccccHHHGGGGGGcHccccGGGTEEccEEETTccHHHHHHHHHHTccEETEEEccccEEEEEEHHHHHHHHHTccccccTTcccccccccEETTccHHHHHHHHHHccccEEEEEccTccEEEEEEHHHHHHHHHHHHHTHHHHHHHHHHTTccccTTcccEEcccccccTTccHHHHHHHHHHHTccEEEEEETT#cEEEEEEEHHHHHHHHHHHHTTccc################################################################################################################# PSIPRED ccHHHccccccEEEcccccHHHHHHHHHHccccEEEEccccEEEEEEEHHHHHHccccccccHHHHccccEEEcccccHHHHHHHHHHccccEEEEEEccEEEEEEcHHHHHHHHHHccccccHHHHcccccEEEcccccHHHHHHHHHHccccEEEEEcccccEEEEEEHHHHHHHHHccccccccHHHHHHHHHHccccHHHHcccccEEEcccccHHHHHHHHHHccccEEEEEEccccEEEEEEEHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccEEEEEEEEEccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcc //