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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM57377.1
DDBJ      :             DNA primase, small subunit
Swiss-Prot:PRIS_HALLT   RecName: Full=Probable DNA primase small subunit;         EC=2.7.7.-;

Homologs  Archaea  52/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.264.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->342 1g71A PDBj 1e-20 32.2 %
:RPS:PDB   143->250 2bhnA PDBj 3e-04 21.4 %
:RPS:SCOP  1->349 1g71A  d.264.1.1 * 1e-57 27.9 %
:HMM:SCOP  1->387 1zt2A1 d.264.1.1 * 1.9e-78 40.2 %
:RPS:PFM   144->178 PF01896 * DNA_primase_S 5e-07 54.3 %
:HMM:PFM   97->318 PF01896 * DNA_primase_S 1.7e-27 32.9 143/145  
:BLT:SWISS 1->387 PRIS_HALLT 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM57377.1 GT:GENE ACM57377.1 GT:PRODUCT DNA primase, small subunit GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(1812370..1813533) GB:FROM 1812370 GB:TO 1813533 GB:DIRECTION - GB:PRODUCT DNA primase, small subunit GB:NOTE TIGRFAM: DNA primase, small subunit; PFAM: DNA primase small subunit; KEGG: hwa:HQ2719A DNA primase small subunit GB:PROTEIN_ID ACM57377.1 GB:DB_XREF GI:222453112 InterPro:IPR002755 InterPro:IPR014052 LENGTH 387 SQ:AASEQ MDDRTREYLKGRFGDYYRRASPALPPDANLREWGHIPWTPGSGTTMLRHQSLYDLGDVDTFFADNAPRHAYFSAARYDDPGASTMSQKGWRSADLVFDLDADHLPGVDPDATSYPEMLAECKQALLRLLDFLEDDFSFDDLTVVFSGGRGYHVHVRDESVRELDSEARREVVDYVRAIDLDTEGLIRTVSERGTTKRVLRTEGGWGARVHEALIEYADDLREMDAEDARERLMELDGIGEGRAETILGAFDRNPTAVREGNVEAGGPGVRRLVSALAARVTATDTAPIDEPVTTDTRRLIRLPRTLHGGSGLVVTPIDRDDLDAFDPLRDAVPDRFVGREIRIETDVDRTVELNGERVRVEPGRNTVPEFAGVFLMARGEARKAPER GT:EXON 1|1-387:0| SW:ID PRIS_HALLT SW:DE RecName: Full=Probable DNA primase small subunit; EC=2.7.7.-; SW:GN Name=priA; OrderedLocusNames=Hlac_1798; SW:KW Complete proteome; DNA replication; DNA-directed RNA polymerase;Nucleotidyltransferase; Primosome; Transcription; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->387|PRIS_HALLT|0.0|100.0|387/387| GO:SWS:NREP 7 GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003899|"GO:DNA-directed RNA polymerase activity"|DNA-directed RNA polymerase| GO:SWS GO:0016779|"GO:nucleotidyltransferase activity"|Nucleotidyltransferase| GO:SWS GO:0006269|"GO:DNA replication, synthesis of RNA primer"|Primosome| GO:SWS GO:0005658|"GO:alpha DNA polymerase:primase complex"|Primosome| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 125->141|llrlldfleddfsfddl| BL:PDB:NREP 1 BL:PDB:REP 48->342|1g71A|1e-20|32.2|273/344| RP:PDB:NREP 1 RP:PDB:REP 143->250|2bhnA|3e-04|21.4|98/211| RP:PFM:NREP 1 RP:PFM:REP 144->178|PF01896|5e-07|54.3|35/175|DNA_primase_S| HM:PFM:NREP 1 HM:PFM:REP 97->318|PF01896|1.7e-27|32.9|143/145|DNA_primase_S| GO:PFM:NREP 2 GO:PFM GO:0003896|"GO:DNA primase activity"|PF01896|IPR002755| GO:PFM GO:0006269|"GO:DNA replication, synthesis of RNA primer"|PF01896|IPR002755| RP:SCP:NREP 1 RP:SCP:REP 1->349|1g71A|1e-57|27.9|323/344|d.264.1.1| HM:SCP:REP 1->387|1zt2A1|1.9e-78|40.2|296/0|d.264.1.1|1/1|Prim-pol domain| OP:NHOMO 53 OP:NHOMOORG 52 OP:PATTERN 1111-111111111111111111111111111--1--------1111111111-111111-111--1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 329 STR:RPRED 85.0 SQ:SECSTR ########HHHHHHHHHHcccccccTTGGGccEEEEET###TccccEEEEccccHHHHHHHHHHHcccEEEEEcEEEEEGTcccGGTEEEEEEcEEEEEEcTTcccccTTTcccHHHHHHHHHHHHHHHHHHHHTTccccEEccEEccHHHHHHHHHHHHHHHTcTTccccccHHTTcc###ccccccccHHHHHHHHHTTcccccHHHHHHHHHHHccHHHHHTcccHHHHHTcTTccHHHHHHHHHHHHHTHHHHHHHTTTTcTccHHHHHHHHHHHHHHHHTTcccHHHHHcTTcEEEcTTcEETTTTEEcEEEEccHHHHccHHHHccc#GGGHHHHHHH########################################### DISOP:02AL 386-388| PSIPRED ccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccEEEEEEccccHHHHHHHHHHHccccEEEEcHHccccccccHHHHHHHHcHHcEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEccHHHHcccHHHHHHHHHHHHHcccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHcccHHHHcccccccccccEEEEEccHHHHccccccccccccccccccEEEEEccccEEEEcccccccccccEEEcHHHEEEEEEcccccccccc //