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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM57703.1
DDBJ      :             PAS/PAC sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  492/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.110.3d.122.1d.131.1
:559 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   407->551 2c2aA PDBj 3e-09 26.6 %
:RPS:PDB   244->287 3b33A PDBj 3e-05 29.5 %
:RPS:PDB   354->552 3d36B PDBj 6e-21 19.1 %
:RPS:SCOP  244->287 1s66L  d.110.3.2 * 3e-04 22.7 %
:RPS:SCOP  354->409 1joyA  a.30.2.1 * 2e-08 24.5 %
:RPS:SCOP  396->502 1vpkA1  d.131.1.1 * 1e-14 15.0 %
:HMM:SCOP  251->341 1dp6A_ d.110.3.2 * 1.8e-07 36.0 %
:HMM:SCOP  333->414 2c2aA1 a.30.2.1 * 9.6e-12 31.7 %
:HMM:SCOP  416->558 1ysrA1 d.122.1.3 * 1.9e-29 33.6 %
:RPS:PFM   246->327 PF00989 * PAS 5e-06 37.8 %
:RPS:PFM   455->552 PF02518 * HATPase_c 5e-08 29.6 %
:HMM:PFM   453->551 PF02518 * HATPase_c 1.8e-23 35.4 99/111  
:HMM:PFM   352->412 PF00512 * HisKA 2.6e-14 39.3 61/68  
:HMM:PFM   247->289 PF08448 * PAS_4 8.8e-07 30.2 43/110  
:HMM:PFM   310->333 PF08448 * PAS_4 0.00037 41.7 24/110  
:BLT:SWISS 359->551 CPXA_ECOLI 4e-13 31.0 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM57703.1 GT:GENE ACM57703.1 GT:PRODUCT PAS/PAC sensor signal transduction histidine kinase GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(2117125..2118804) GB:FROM 2117125 GB:TO 2118804 GB:DIRECTION - GB:PRODUCT PAS/PAC sensor signal transduction histidine kinase GB:NOTE PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: nph:NP1506A signal-transducing histidine kinase GB:PROTEIN_ID ACM57703.1 GB:DB_XREF GI:222453438 InterPro:IPR000700 InterPro:IPR003594 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 InterPro:IPR013656 LENGTH 559 SQ:AASEQ MSDLGALPVQAYLAACLLAGVIGVWLGRVAWVDRDEPGGTEVSLYLFCGGAVSLLYAVRVASASELAMIVALNLSTPLVAAVPGIWMAFVLAFSGHDRWRTENRTVALAAPPFVWVLTAWSSGTHGLSRRSLAAVVEGPFTLLSFGLGIADVAFVLYAYGLCIAGVLVVVDLYRRTGNRYRLQTFVILLGTLFPFLGGIVTVVDVGSYAHLAWFPAGLVVHGVFLYGTVFWLGTLDAAVVARDTAVEVMQDPVIVAGSDGRIRDLNPAAEELLPSDAVGSSLSNVFPLLEVGVEHPISIGGRQFDIQEDPITDPRGTDRGHVFLLRDVTERERRQTELERREVELERQNERLEDFAGVVSHDLRNPLAAATAAVELARHGDRNNEDALDRAANAHERMDDLIEGLLSLATAGKSVDEVDRVSLDGTARRVWSRLETADATLSVNGPDVSALADGDRLEQLLSNLFRNAIEHAGDDVTVRVEIERREDDIALTVADDGPGVPPDQRSQVIERGVSLGGGTGLGLAIVGDIAEAHGWELSVEESASGGARFVISGIEPADD GT:EXON 1|1-559:0| BL:SWS:NREP 1 BL:SWS:REP 359->551|CPXA_ECOLI|4e-13|31.0|187/457| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 326->354| TM:NTM 7 TM:REGION 7->29| TM:REGION 45->67| TM:REGION 72->93| TM:REGION 106->128| TM:REGION 152->173| TM:REGION 183->205| TM:REGION 218->240| SEG 328->353|vtererrqtelerrevelerqnerle| SEG 368->373|aaataa| SEG 515->523|lgggtglgl| BL:PDB:NREP 1 BL:PDB:REP 407->551|2c2aA|3e-09|26.6|143/240| RP:PDB:NREP 2 RP:PDB:REP 244->287|3b33A|3e-05|29.5|44/105| RP:PDB:REP 354->552|3d36B|6e-21|19.1|199/221| RP:PFM:NREP 2 RP:PFM:REP 246->327|PF00989|5e-06|37.8|82/112|PAS| RP:PFM:REP 455->552|PF02518|5e-08|29.6|98/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 453->551|PF02518|1.8e-23|35.4|99/111|HATPase_c| HM:PFM:REP 352->412|PF00512|2.6e-14|39.3|61/68|HisKA| HM:PFM:REP 247->289|PF08448|8.8e-07|30.2|43/110|PAS_4| HM:PFM:REP 310->333|PF08448|0.00037|41.7|24/110|PAS_4| GO:PFM:NREP 2 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 244->287|1s66L|3e-04|22.7|44/119|d.110.3.2| RP:SCP:REP 354->409|1joyA|2e-08|24.5|53/67|a.30.2.1| RP:SCP:REP 396->502|1vpkA1|1e-14|15.0|107/120|d.131.1.1| HM:SCP:REP 251->341|1dp6A_|1.8e-07|36.0|89/0|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 333->414|2c2aA1|9.6e-12|31.7|82/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 416->558|1ysrA1|1.9e-29|33.6|140/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 1299 OP:NHOMOORG 512 OP:PATTERN -----------------------1d66J5QKJ-----1-21-124-115-2----------------- -432311111111212211-1211121111113444-3421122-1---11-1331-1--115-1-147811--------31---1-1-----------2-------354--------------------1--1--78775211623-52-1-1111----11-114433--1-----1----2531122-41111111--111-1-1-12331-111112115333333234-111111111111111111---1-----1-1------------1------111-------------------------------------12-2-1111111-1-11--1-----21-2-232531141--12113----3-54111-----223323111321-12222222224-2222253314--333343456625-51221-32122213--------1111-A12------------------------------232321-1-25545551444355325555155731121--1231--2142-25-1122-2111-------2-2122331--12--31113-22233521168C8GO11-------------------------1132-2111-311-----1--1---1---1-----1221------5111-132222222322-2322222223223222222112-----4443434444434334222222221-311111111111---------111111241-------------------------4122223244145612366---------2----------1---232-4--111-------1-------------------------------------------1--1-1-1-121 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 318 STR:RPRED 56.9 SQ:SECSTR ##########################################################################################################################################################################################################################################HHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTccccTTTTTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHcccHHHHHHHGGGGccTTcHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEHHHHHHHHHHHHHHHHTTEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEEEEEEEEEETTEEEEEEEEccccccHHHHHHTTcccccGGGccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEE####### DISOP:02AL 8-20| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEcHHHHHHcccccccccHHHHHHHHHHcccEEEccccEEEEEEEEEEEcccccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcHHHHHHHHHHHHHHcccEEEEEccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHccccEEcccccccHHHHHHHHHHHcccEEEEEEEccccEEEEEEEEccccc //