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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM57734.1
DDBJ      :             PUA domain containing protein
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.122.1c.1.20c.18.1c.72.1d.17.6
:600 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   93->194 2nsoA PDBj 5e-06 32.7 %
:BLT:PDB   284->595 2q07A PDBj 3e-16 33.1 %
:RPS:PDB   94->212 3bl3A PDBj 7e-12 26.3 %
:RPS:PDB   239->411 1bbuA PDBj 2e-05 14.4 %
:RPS:PDB   444->597 3d79A PDBj 2e-16 24.3 %
:RPS:SCOP  5->29,94->260 1iq8A1  c.1.20.1 * 1e-23 24.1 %
:RPS:SCOP  232->274 1gc5A  c.72.1.3 * 4e-04 14.0 %
:RPS:SCOP  284->436 2q07A2  c.18.1.4 * 6e-32 36.3 %
:RPS:SCOP  533->595 2q07A1  b.122.1.1 * 1e-14 41.0 %
:HMM:SCOP  1->262 1iq8A1 c.1.20.1 * 6.2e-48 28.5 %
:HMM:SCOP  263->530 1iq8A4 d.17.6.1 * 5e-29 34.5 %
:HMM:SCOP  530->599 1iq8A3 b.122.1.1 * 2.9e-14 47.1 %
:RPS:PFM   544->597 PF01472 * PUA 1e-06 40.7 %
:HMM:PFM   94->236 PF01702 * TGT 1.1e-16 26.1 142/238  
:HMM:PFM   544->597 PF01472 * PUA 4e-16 38.9 54/74  
:BLT:SWISS 101->597 Y1022_METJA 1e-28 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM57734.1 GT:GENE ACM57734.1 GT:PRODUCT PUA domain containing protein GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(2144100..2145902) GB:FROM 2144100 GB:TO 2145902 GB:DIRECTION - GB:PRODUCT PUA domain containing protein GB:NOTE PFAM: PUA domain containing protein; KEGG: hma:rrnAC3261 archaeosine tRNA-ribosyltransferase GB:PROTEIN_ID ACM57734.1 GB:DB_XREF GI:222453469 InterPro:IPR002478 InterPro:IPR004521 LENGTH 600 SQ:AASEQ MTDYFEIHERDGAARLGELRLADPVTTPALADPFLADAGSLWAAERTVPDGDEASLTVLPHRAFPAGTRGEVRESFAVDHPEVDFPAAAVVDSESARHVGADAYVLADASGFVGHGEAFRDAIVSAKESLPADTALMLSGVATPRNVALLAYAGVDLVDETLARTKGAQGMYCTADAEHFLEDLDELPCACPACAGPREEFTRADCAEHNVNALRAELRRVRERIRAGRLRDYIEGQTRHEQWLTAAFREFDDQWGYVEERTPLMRDAEVTAATAETLDRVEIRRFADRVTSRYQNRFTDQPLVLVPCSATKPYSDSQSHGQFHDAIQWRGHTVSMTSPIGVVPQELETTYPAQHYDAVVTGDWSEDEIGFVAEVLRRYLERNDYSRVVAHVPEDGYREICERVESDPAIDVSFEYTCVGHPTSDESLGELNAALQGEPAYSKREREHNTVRALADYLLGDGAGDDLFGGPGEADIRTTGRYPKLQVWGDDPDAGREGEPGEQLATMVPQYGTLSFTLAGARRWAESDAPTKRVEIDPFVPHGSVLAPGVVDADDDIRVGDEVVIEGPKAFAIGRAEMSGPEMVESTRGVASEVRHVDET GT:EXON 1|1-600:0| BL:SWS:NREP 1 BL:SWS:REP 101->597|Y1022_METJA|1e-28|29.0|442/569| SEG 213->231|alraelrrvreriragrlr| SEG 453->472|aladyllgdgagddlfggpg| BL:PDB:NREP 2 BL:PDB:REP 93->194|2nsoA|5e-06|32.7|101/367| BL:PDB:REP 284->595|2q07A|3e-16|33.1|260/266| RP:PDB:NREP 3 RP:PDB:REP 94->212|3bl3A|7e-12|26.3|114/367| RP:PDB:REP 239->411|1bbuA|2e-05|14.4|146/486| RP:PDB:REP 444->597|3d79A|2e-16|24.3|144/167| RP:PFM:NREP 1 RP:PFM:REP 544->597|PF01472|1e-06|40.7|54/74|PUA| HM:PFM:NREP 2 HM:PFM:REP 94->236|PF01702|1.1e-16|26.1|142/238|TGT| HM:PFM:REP 544->597|PF01472|4e-16|38.9|54/74|PUA| GO:PFM:NREP 1 GO:PFM GO:0003723|"GO:RNA binding"|PF01472|IPR002478| RP:SCP:NREP 4 RP:SCP:REP 5->29,94->260|1iq8A1|1e-23|24.1|191/355|c.1.20.1| RP:SCP:REP 232->274|1gc5A|4e-04|14.0|43/467|c.72.1.3| RP:SCP:REP 284->436|2q07A2|6e-32|36.3|135/138|c.18.1.4| RP:SCP:REP 533->595|2q07A1|1e-14|41.0|61/66|b.122.1.1| HM:SCP:REP 1->262|1iq8A1|6.2e-48|28.5|256/0|c.1.20.1|1/1|tRNA-guanine transglycosylase| HM:SCP:REP 263->530|1iq8A4|5e-29|34.5|145/0|d.17.6.1|1/1|Pre-PUA domain| HM:SCP:REP 530->599|1iq8A3|2.9e-14|47.1|70/77|b.122.1.1|1/1|PUA domain-like| OP:NHOMO 57 OP:NHOMOORG 42 OP:PATTERN --1--1-----------------11111-22121211222221111111212211121112111---- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 517 STR:RPRED 86.2 SQ:SECSTR #################################################################cHHHHHHcEEEEEEccTTcHHHHHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHGGGccTTccEEETTcccHHHHHHHHHTTccEEEccHHHHHHHHTEEccTTccEETTcGGccccccHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHTTTcEEcccccEEccccccccccEEETTTTEEEEEccccHHHHHHHHTTccEEEEEEEEEcccccccccccEEEEEEEEEEcccHHc#EEEGGGTTcc###########HHHHHHHHHHHHHHHHHHcccEEETTEEEEcccccHHHHEEEEHHHHHHEEcccccT###TcHHHHHHHHHHHcccccHHHcHHHHHHHHHHHHHHHcHHHHHHHccTTccEEEEEEETTEEEEEETTEEEEEEETTTTEEEEEEETEEEEcHHHHHHHTTTccGGGcTTEEEEcGHHTTccEEGGGEEEEcTTccTTcEEEETTccEEEEEEEcccHHHHHHccccEEEEEEEE### PSIPRED ccccEEEEEEccccEEEEEEEccccccccccccEEccccccccccccccccccccEEEccccccccccHHHHHHHHHcccHHHHHHHHHHccHHHHHccccccEEEEccccccccHHHHHHHHHHHHHcccccccEEEcccccHHHHHHHHHcccccHHHHHHHHHccccEEEcccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccHHHHHHccccccEEEEEEccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHHHHHcccccEEEEEEccccEEEEEEEccccccEEccccEEEEEEEccccEEEEEHHHHHHHHHccccccEEEEccccccccEEccEEEccccccccccEEEEEccEEEEEEEEcccHHHHHHcccccEEEEEEcccc //