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Halorubrum lacusprofundi ATCC 49239 (hlac0)
Chromosome : 1
Gene : ACM57738.1
DDBJ      :             protein of unknown function DUF34
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  288/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.135.1
:260 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->260 2yybA PDBj 2e-29 37.1 %
:RPS:SCOP  2->257 1nmoA  c.135.1.1 * 2e-47 33.2 %
:HMM:SCOP  1->256 2gx8A1 c.135.1.1 * 1.8e-65 35.4 %
:RPS:PFM   28->246 PF01784 * NIF3 1e-16 34.6 %
:HMM:PFM   16->247 PF01784 * NIF3 2.3e-51 32.0 219/242  
:BLT:SWISS 1->260 Y1766_HALSA 7e-66 57.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACM57738.1 GT:GENE ACM57738.1 GT:PRODUCT protein of unknown function DUF34 GT:DATABASE GIB00862CH01 GT:ORG hlac0 GB:ACCESSION GIB00862CH01 GB:CHROMOSOME 1 GB:LOCATION complement(2149339..2150121) GB:FROM 2149339 GB:TO 2150121 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF34 GB:NOTE PFAM: protein of unknown function DUF34; KEGG: nph:NP4756A hypothetical protein GB:PROTEIN_ID ACM57738.1 GB:DB_XREF GI:222453473 InterPro:IPR002678 LENGTH 260 SQ:AASEQ MERSEYVRRLDDRLDTAAYADVDASANGLQVGSDRGEIERVAFAVDAADATIEAAADADADVLVVHHGISWGGIDRVTDRTYDRVAALADHDLALYVSHLPLDGHPDLGNAAGVAAELGLDDREPFGDIGPVTIGTIGEADAPRSAASLRETLDGFEGQPDGEDEESPTQVIDFGPDEIQRIAVVTGSGTDWLDEAVDAGADALVTGEGKGQVYHDAREAGLTVFLAGHYATETFGVRSLQALTEEWGLETTYVSHPTGL GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 1->260|Y1766_HALSA|7e-66|57.3|253/253| SEG 41->65|vafavdaadatieaaadadadvlvv| BL:PDB:NREP 1 BL:PDB:REP 1->260|2yybA|2e-29|37.1|240/242| RP:PFM:NREP 1 RP:PFM:REP 28->246|PF01784|1e-16|34.6|208/240|NIF3| HM:PFM:NREP 1 HM:PFM:REP 16->247|PF01784|2.3e-51|32.0|219/242|NIF3| RP:SCP:NREP 1 RP:SCP:REP 2->257|1nmoA|2e-47|33.2|241/247|c.135.1.1| HM:SCP:REP 1->256|2gx8A1|1.8e-65|35.4|246/0|c.135.1.1|1/1|NIF3 (NGG1p interacting factor 3)-like| OP:NHOMO 304 OP:NHOMOORG 304 OP:PATTERN -----------------------111111111----------------------1111111------- --------------------------------------------------------------------------------------------------------------1------11111111-------------------11-------------------------------------11111--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111--11111-111-1111111-111111111111111111------------------------------1----------------------------11111-1111111111111111111111111-1-1111--11111111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--1-------111111111111111111-111111111111111-111111111111111111----1---111111111111111--------------111-------1111111111---------------------------1---------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHTTGGGcTTccccccEEEEcccccccccEEEEEEccHHHHHHHHHTTccEEEEEEcccccccccccHHHHHHHHHHHHTTcEEEEccHHHHHcTTTcHHHHHHHTTTccccccccEEETTETTccccccccccccTHHHHHHHTTccccGGGGGccEEEEEccccccccEEEEccccGGGGGGcHHHcccEEEEccccGGGHHHHHHTTcEEEEccHHHHTTHHHHHHHHHHHHHcccEEEccccccc DISOP:02AL 260-261| PSIPRED ccHHHHHHHHHHHccHHHccccccccccEEEccccccEEEEEEEEcccHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHccEEEEEccccccccccEEEEEcccccHHHHHHHHHHHcccccEEcccccEEEcccccccEEEEEEEEccHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEccccc //