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Homo sapiens (cDNA) (huge0)
Gene : KIAA0007
DDBJ      :             KIAA0007
Swiss-Prot:WDR43_HUMAN  RecName: Full=WD repeat-containing protein 43;

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  148/199 : Viruses  0/175   --->[See Alignment]
b.69.4b.70.1
:686 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->123 2pm7D PDBj 1e-04 30.7 %
:BLT:PDB   96->244 2o9kC PDBj 3e-10 24.5 %
:RPS:PDB   20->238 1bl9A PDBj 2e-25 7.9 %
:RPS:SCOP  28->225 1g72A  b.70.1.1 * 3e-23 8.8 %
:HMM:SCOP  28->309 1gotB_ b.69.4.1 * 1.2e-35 31.3 %
:RPS:PFM   482->585 PF04003 * Utp12 1e-11 35.6 %
:HMM:PFM   28->51 PF00400 * WD40 0.00057 47.8 23/39  
:HMM:PFM   128->163 PF00400 * WD40 1.1e-09 33.3 36/39  
:HMM:PFM   168->202 PF00400 * WD40 1.3e-07 42.9 35/39  
:HMM:PFM   482->587 PF04003 * Utp12 7.5e-24 30.2 106/110  
:HMM:PFM   580->677 PF05758 * Ycf1 0.00012 25.8 97/929  
:BLT:SWISS 19->686 WDR43_HUMAN 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0007 GT:ORG huge0 GT:GENE KIAA0007 GT:PRODUCT KIAA0007 GT:DATABASE huge2038 LENGTH 686 SQ:AASEQ RGCSGARAAMAAGGGGSCDPLAPAGVPCAFSPHSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSILLYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKWKGDNSSVSSLCISPDGKMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFEHILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGSWFQPTIERVALNSREPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPPQTEQVESKRKSGGNEVSIEERLGAMDIDTHKKGKEDLQTNSFPVLLTQGLESNDFEMLNKVLQTRNVNLIKKTVLRMPLHTIIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLSTLPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEESESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE SW:ID WDR43_HUMAN SW:DE RecName: Full=WD repeat-containing protein 43; SW:GN Name=WDR43; Synonyms=KIAA0007; SW:KW Complete proteome; Nucleus; Phosphoprotein; Repeat; WD repeat. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 19->686|WDR43_HUMAN|0.0|100.0|668/677| GO:SWS:NREP 1 GO:SWS GO:0005634|"GO:nucleus"|Nucleus| TM:NTM 1 TM:REGION 102->124| SEG 1->18|rgcsgaraamaaggggsc| SEG 330->344|tpgkgkkstpkpipi| SEG 609->662|eeesseeesddeiadkdsednwdedeeesesekdedveeededaegkdeenged| BL:PDB:NREP 2 BL:PDB:REP 30->123|2pm7D|1e-04|30.7|88/282| BL:PDB:REP 96->244|2o9kC|3e-10|24.5|147/303| RP:PDB:NREP 1 RP:PDB:REP 20->238|1bl9A|2e-25|7.9|216/537| RP:PFM:NREP 1 RP:PFM:REP 482->585|PF04003|1e-11|35.6|104/107|Utp12| HM:PFM:NREP 5 HM:PFM:REP 28->51|PF00400|0.00057|47.8|23/39|WD40| HM:PFM:REP 128->163|PF00400|1.1e-09|33.3|36/39|WD40| HM:PFM:REP 168->202|PF00400|1.3e-07|42.9|35/39|WD40| HM:PFM:REP 482->587|PF04003|7.5e-24|30.2|106/110|Utp12| HM:PFM:REP 580->677|PF05758|0.00012|25.8|97/929|Ycf1| RP:SCP:NREP 1 RP:SCP:REP 28->225|1g72A|3e-23|8.8|194/571|b.70.1.1| HM:SCP:REP 28->309|1gotB_|1.2e-35|31.3|243/0|b.69.4.1|1/1|WD40 repeat-like| OP:NHOMO 496 OP:NHOMOORG 168 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------1-------------------------------------------------------1----1---1-1---3-----E583-14------------13FBF3--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------3-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----14-----221-22-46313473---1--1-12212112---16161--3--16----111111-111112------1111122-111214D222--1-231-22347434454222344331539E41444122132324142324323373331112241-21261212-531F----22334521---221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 308 STR:RPRED 44.9 SQ:SECSTR ##################HcccccGGGccccccccccccHHHHHHHHHHHHHHTHHHHcccccccccccccHHHHHHHHccTTccccTTTTccccHHHHHHHHHHTTccccccccccHHHHHHHcEEcccETTTccccccccccGGGEEEEEEGGGTEEEEEETTTccEEEEEEEccTTEEEEEEcTTccEEEEEEcEEEEEEccccccEEEEEEEcccEEEEEEEcccTTcTTcEEEEEEEcccccccEcccEEEEEEEEEEcccccEEEEEEcccEEEEEEEcccTTcTTTEEEEEEEETTEEEEEETTTccEEEEEEccEEcT######################################################################################################################################################################################################################################################################################################################################################################## DISOP:02AL 1-3,432-442,452-469,592-605,610-687| PSIPRED ccccccEEEEEEccccEEEEcccccEEEEEcccccEEEEEEccccEEEEEEccccEEEEEEEEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEccEEEEEEccccEEEEEEEcccccEEEEEEccccccEEccccccccEEEEEEEEEcccEEEEEEccccccccEEEEEEEcccccEEEEEEEcccccccEEEEEEEcccEEEEEEccccccEEEEcccccEEEEccccccccccccccEEEEEEEccccEEEEEEEcccEEEEEEEEEEccccccEEEEEEcccccccccccccccccEEEEcccccEEEcccccccccccccccccHHHccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHccccccccccccccccc //