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Homo sapiens (cDNA) (huge0)
Gene : KIAA0020
DDBJ      :             KIAA0020
Swiss-Prot:K0020_HUMAN  RecName: Full=Pumilio domain-containing protein KIAA0020;AltName: Full=HBV X-transactivated gene 5 protein;AltName: Full=Minor histocompatibility antigen HA-8;         Short=HLA-HA8;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
a.118.1
:647 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   165->403 1m8zA PDBj 6e-13 22.8 %
:RPS:PDB   161->496 3bx2A PDBj 2e-40 16.9 %
:RPS:SCOP  154->458 1ib2A  a.118.1.8 * 2e-52 21.6 %
:HMM:SCOP  144->479 1m8zA_ a.118.1.8 * 7.7e-79 30.6 %
:HMM:SCOP  488->646 1m8zA_ a.118.1.8 * 4.9e-08 20.9 %
:RPS:PFM   432->565 PF08144 * CPL 1e-30 47.8 %
:HMM:PFM   432->579 PF08144 * CPL 6.3e-72 68.2 148/148  
:HMM:PFM   374->451 PF11968 * DUF3321 0.00035 19.2 78/220  
:BLT:SWISS 1->647 K0020_HUMAN 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0020 GT:ORG huge0 GT:GENE KIAA0020 GT:PRODUCT KIAA0020 GT:DATABASE huge2038 LENGTH 647 SQ:AASEQ EVKGKKQFTGKSTKTAQEKNRFHKNSDSGSSKTFPTRKVAKEGGPKVTSRNFEKSITKLGKKGVKQFKNKQQGDKSPKNKFQPANKFNKKRKFQPDGRSDESAAKKPKWDDFKKKKKELKQSRQLSDKTNYDIVVRAKQMWEILRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHRTLDKVLEVQPEKLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSEMIEAIREAVVYLAHTHDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKVANGQYSHLVLLAAFDCIDDTKLVKQIIISEIISSLPSIVNDKYGRKVLLYLLSPRDPAHTVREIIEVLQKGDGNAHSKKDTEVRRRELLESISPALLSYLQEHAQEVVLDKSACVLVSDILGSATGDVQPTMNAIASLAATGLHPGGKDGELHIAEHPAGHLVLKWLIEQDKKMKENGREGCFAKTLVEHVGMKNLKSWASVNRGAIILSSLLQSCDLEVANKVKAALKSLIPTLEKTKSTSKGIEILLEKLST SW:ID K0020_HUMAN SW:DE RecName: Full=Pumilio domain-containing protein KIAA0020;AltName: Full=HBV X-transactivated gene 5 protein;AltName: Full=Minor histocompatibility antigen HA-8; Short=HLA-HA8; SW:GN Name=KIAA0020; Synonyms=XTP5; SW:KW Complete proteome; Direct protein sequencing; Nucleus; Polymorphism;Repeat; RNA-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->647|K0020_HUMAN|0.0|100.0|647/648| GO:SWS:NREP 2 GO:SWS GO:0005634|"GO:nucleus"|Nucleus| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| SEG 105->120|kkpkwddfkkkkkelk| SEG 419->431|iiiseiisslpsi| BL:PDB:NREP 1 BL:PDB:REP 165->403|1m8zA|6e-13|22.8|232/339| RP:PDB:NREP 1 RP:PDB:REP 161->496|3bx2A|2e-40|16.9|308/328| RP:PFM:NREP 1 RP:PFM:REP 432->565|PF08144|1e-30|47.8|134/141|CPL| HM:PFM:NREP 2 HM:PFM:REP 432->579|PF08144|6.3e-72|68.2|148/148|CPL| HM:PFM:REP 374->451|PF11968|0.00035|19.2|78/220|DUF3321| GO:PFM:NREP 1 GO:PFM GO:0003723|"GO:RNA binding"|PF08144|IPR012959| RP:SCP:NREP 1 RP:SCP:REP 154->458|1ib2A|2e-52|21.6|296/322|a.118.1.8| HM:SCP:REP 144->479|1m8zA_|7.7e-79|30.6|327/0|a.118.1.8|1/2|ARM repeat| HM:SCP:REP 488->646|1m8zA_|4.9e-08|20.9|139/0|a.118.1.8|2/2|ARM repeat| OP:NHOMO 362 OP:NHOMOORG 184 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----111-311-1121121111111111111111111211111111222211212221211111111121112-11212111111111-122111111111--325-1-122111-3111112188141DY4334912112123322122321316222--211112622411111111H1111113342431111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 50.7 SQ:SECSTR ###########################################################################################################################################################TTTTccccccTTcTGGGGccHHHHHHHHHHHHHHccHHHHHHHHHHGGGHHHHHTcTTHHHHHHHHHHHccHHHHHHHHHHHGGGHHHHHTcTTHHHHHHHHHHHcccHHHHHHHHHHHGGGHHHHHTcTHHHHHHHHHHccHHHHHHHHHHHHHTHHHHHTcTHHHTcTTHHHHHHHHHHHccHHHHHHHHHHHHTTHHHHHTcTTHHHHHHHHHHHHHHHTcHHHHHHHGGGHHHHHTcTTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHcHHH#############HHHHHcHHHHHHHHHHHHHHcccGGGGc####################################################################################################################################################### DISOP:02AL 1-134,146-154,647-648| PSIPRED ccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccHHEEccHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcc //