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Homo sapiens (cDNA) (huge0)
Gene : KIAA0064
DDBJ      :             KIAA0064
Swiss-Prot:SNX17_HUMAN  RecName: Full=Sorting nexin-17;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  67/199 : Viruses  0/175   --->[See Alignment]
a.11.2d.15.1d.189.1
:495 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->130 3fogA PDBj 5e-51 100.0 %
:RPS:PDB   5->283 3dyuA PDBj 1e-20 12.6 %
:RPS:SCOP  26->127 1xteA  d.189.1.1 * 4e-15 22.0 %
:RPS:SCOP  144->228 1wxaA1  d.15.1.5 * 8e-09 12.9 %
:RPS:SCOP  235->307 2aehA1  a.11.2.1 * 9e-07 23.3 %
:HMM:SCOP  8->138 1h6hA_ d.189.1.1 * 1e-24 24.6 %
:HMM:SCOP  133->237 1wgrA_ d.15.1.5 * 0.00011 24.2 %
:RPS:PFM   59->127 PF00787 * PX 2e-10 42.0 %
:HMM:PFM   36->128 PF00787 * PX 2.4e-19 30.8 91/113  
:HMM:PFM   154->228 PF00788 * RA 2.6e-05 21.4 70/93  
:HMM:PFM   267->299 PF00373 * FERM_M 0.0003 33.3 33/117  
:HMM:PFM   121->163 PF01709 * DUF28 0.001 23.3 43/234  
:BLT:SWISS 26->495 SNX17_HUMAN 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0064 GT:ORG huge0 GT:GENE KIAA0064 GT:PRODUCT KIAA0064 GT:DATABASE huge2038 LENGTH 495 SQ:AASEQ AAEGERAEPLRPSQSGARPCRAVGNMHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGSTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDATRESMVKLSSKLSAVSLRGIGSPSTDASASDVHGNFAFEGIGDEDL SW:ID SNX17_HUMAN SW:DE RecName: Full=Sorting nexin-17; SW:GN Name=SNX17; Synonyms=KIAA0064; SW:KW 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing;Endosome; Phosphoprotein; Protein transport; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 26->495|SNX17_HUMAN|0.0|100.0|470/470| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0005768|"GO:endosome"|Endosome| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0006810|"GO:transport"|Transport| SEG 131->142|qqetqqvpteev| SEG 348->367|vtssvplpsgstsspgrgrg| SEG 453->466|smvklssklsavsl| BL:PDB:NREP 1 BL:PDB:REP 27->130|3fogA|5e-51|100.0|97/102| RP:PDB:NREP 1 RP:PDB:REP 5->283|3dyuA|1e-20|12.6|278/366| RP:PFM:NREP 1 RP:PFM:REP 59->127|PF00787|2e-10|42.0|69/109|PX| HM:PFM:NREP 4 HM:PFM:REP 36->128|PF00787|2.4e-19|30.8|91/113|PX| HM:PFM:REP 154->228|PF00788|2.6e-05|21.4|70/93|RA| HM:PFM:REP 267->299|PF00373|0.0003|33.3|33/117|FERM_M| HM:PFM:REP 121->163|PF01709|0.001|23.3|43/234|DUF28| GO:PFM:NREP 3 GO:PFM GO:0005515|"GO:protein binding"|PF00787|IPR001683| GO:PFM GO:0007154|"GO:cell communication"|PF00787|IPR001683| GO:PFM GO:0035091|"GO:phosphoinositide binding"|PF00787|IPR001683| RP:SCP:NREP 3 RP:SCP:REP 26->127|1xteA|4e-15|22.0|100/116|d.189.1.1| RP:SCP:REP 144->228|1wxaA1|8e-09|12.9|85/103|d.15.1.5| RP:SCP:REP 235->307|2aehA1|9e-07|23.3|73/123|a.11.2.1| HM:SCP:REP 8->138|1h6hA_|1e-24|24.6|130/143|d.189.1.1|1/1|PX domain| HM:SCP:REP 133->237|1wgrA_|0.00011|24.2|99/0|d.15.1.5|1/1|Ubiquitin-like| OP:NHOMO 209 OP:NHOMOORG 67 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1----------------------------------------------------------------------------------------------------2--36335422353332532418P32436233242333333223314331322312222222221322------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 89.9 SQ:SECSTR ####ccEEEEccc#cccEEccccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEHHHHHHHHHHHHHHHTTTcccccccccccTTcHHHHHHHHHHHHHHHHHHHTcTTTTTcHHHHHHHccccTTHHHHHHHHHHTccccGGGGGGGEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHTcGGGTHHHHHHHHHHHHHHHHTTTGGGTcHHccTTTccTTTTTTcccccHHHHHHccccHHHHHHTTcHHHHHHHHHHTTcTTTEEEEEcTTccEEEEEEETTEEEEEETTccccccEEEEGGGEEEEETTEEEEEEcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHc##cccccccccTTcccccccccccccEE########################################### DISOP:02AL 1-21,37-39,273-275,412-454,494-496| PSIPRED ccccccccccccHHHccccccccccEEEEEcccEEEEccccccEEEEEEEEEccEEEEEEccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHcccccccccccccHHHEEcccccccEEEEEEEcccccHHHHHHHHHHHccccHHHHcEEEEEEEEccccccccHHHHHHccccccEEEEEEEcccccEEEEccEEcHHHcccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEcccccccEEEEEEEccEEEEEEEcccccEEEEEEEEEEEEEEEEEEEcccccccccccccccccccHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccEEcccccEEcccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccc //