[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Homo sapiens (cDNA) (huge0)
Gene : KIAA0179
DDBJ      :             KIAA0179
Swiss-Prot:RRP1B_HUMAN  RecName: Full=Ribosomal RNA processing protein 1 homolog B;AltName: Full=RRP1-like protein B;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  137/199 : Viruses  0/175   --->[See Alignment]
:762 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   34->222 PF05997 * Nop52 8e-45 46.8 %
:HMM:PFM   31->223 PF05997 * Nop52 3.2e-56 41.5 193/217  
:HMM:PFM   532->571 PF02628 * COX15-CtaA 0.00047 37.5 40/301  
:BLT:SWISS 31->762 RRP1B_HUMAN 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0179 GT:ORG huge0 GT:GENE KIAA0179 GT:PRODUCT KIAA0179 GT:DATABASE huge2038 LENGTH 762 SQ:AASEQ PQRSAGCSGTAGCAAGDAPAGAMAPAMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGWEESRIKVFLDVLMKEVLCPESQSPNGVRFHFIDIYLDELSKVGGKELLADQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGDGDLSAEEIPENEVSLRRAVSKKKTALGKNHSRKDGLSDERGRDDCGTFEDTGPLLQFDYKAVADRLLEMTSRKNTPHFNRKRLSKLIKKFQDLSEGSSISQLSFAEDISADEDDQILSQGKHKKKGNKLLEKTNLEKEKGSRVFCVEEEDSESSLQKRRRKKKKKHHLQPENPGPGGAAPSLEQNRGREPEASGPKALKARVAEPGAEATSSTGEESGSEHPPAVPMHNKRKRPRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPTGGAQLLKRKRKLGVVPVNGSGLSTPAWPPLQQEGPPTGPAEGANSHTTLPQRRRLQKKKAGPGSLELCGLPSQKTASLKKRKKMRVMSNLVEHNGVLESEAGQPQALGSSGTCSSLKKQKLRAESDFVKFDTPFLPKPLFFRRAKSSTATHPPGPAVQLNKTPSSSKKVTFGLNRNMTAEFKKTDKSILVSPTGPSRVAFDPEQKPLHGVLKTPTSSPASSPLVAKKPLTTTPRRRPRAMDFF SW:ID RRP1B_HUMAN SW:DE RecName: Full=Ribosomal RNA processing protein 1 homolog B;AltName: Full=RRP1-like protein B; SW:GN Name=RRP1B; Synonyms=KIAA0179; SW:KW Acetylation; Alternative splicing; Complete proteome; Nucleus;Phosphoprotein. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 31->762|RRP1B_HUMAN|0.0|100.0|732/758| GO:SWS:NREP 1 GO:SWS GO:0005634|"GO:nucleus"|Nucleus| SEG 4->30|sagcsgtagcaagdapagamapamqpa| SEG 365->385|gkhkkkgnkllektnlekekg| SEG 402->410|krrrkkkkk| SEG 451->465|gaeatsstgeesgse| SEG 475->485|krkrprkkspr| SEG 502->518|sqsgpsgshpqgprgsp| SEG 747->757|pltttprrrpr| RP:PFM:NREP 1 RP:PFM:REP 34->222|PF05997|8e-45|46.8|188/208|Nop52| HM:PFM:NREP 2 HM:PFM:REP 31->223|PF05997|3.2e-56|41.5|193/217|Nop52| HM:PFM:REP 532->571|PF02628|0.00047|37.5|40/301|COX15-CtaA| GO:PFM:NREP 2 GO:PFM GO:0006364|"GO:rRNA processing"|PF05997|IPR010301| GO:PFM GO:0030688|"GO:preribosome, small subunit precursor"|PF05997|IPR010301| OP:NHOMO 201 OP:NHOMOORG 137 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----11-------11111-----1-1------1-1----------1---1111--1-----1111111111111111111-111111-11111111111111111-1111121114222-122422524F2133412222222--22-131131211111-1111-11311111-11-3---112--11-11111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-12,16-25,235-298,310-331,335-693,697-753,759-759| PSIPRED ccccccccccHHHHcccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccHHccc //