Homo sapiens (cDNA) (huge0)
Gene : KIAA0179
DDBJ : KIAA0179
Swiss-Prot:RRP1B_HUMAN RecName: Full=Ribosomal RNA processing protein 1 homolog B;AltName: Full=RRP1-like protein B;
Homologs Archaea 0/68 : Bacteria 0/915 : Eukaryota 137/199 : Viruses 0/175 --->[See Alignment]
:762 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM 34->222 PF05997 * Nop52 8e-45 46.8 %
:HMM:PFM 31->223 PF05997 * Nop52 3.2e-56 41.5 193/217
:HMM:PFM 532->571 PF02628 * COX15-CtaA 0.00047 37.5 40/301
:BLT:SWISS 31->762 RRP1B_HUMAN 0.0 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0179
GT:ORG huge0
GT:GENE KIAA0179
GT:PRODUCT KIAA0179
GT:DATABASE huge2038
LENGTH 762
SQ:AASEQ PQRSAGCSGTAGCAAGDAPAGAMAPAMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTMNREWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGWEESRIKVFLDVLMKEVLCPESQSPNGVRFHFIDIYLDELSKVGGKELLADQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEAIVDQSPFVPEETMEEQKTKVGDGDLSAEEIPENEVSLRRAVSKKKTALGKNHSRKDGLSDERGRDDCGTFEDTGPLLQFDYKAVADRLLEMTSRKNTPHFNRKRLSKLIKKFQDLSEGSSISQLSFAEDISADEDDQILSQGKHKKKGNKLLEKTNLEKEKGSRVFCVEEEDSESSLQKRRRKKKKKHHLQPENPGPGGAAPSLEQNRGREPEASGPKALKARVAEPGAEATSSTGEESGSEHPPAVPMHNKRKRPRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPTGGAQLLKRKRKLGVVPVNGSGLSTPAWPPLQQEGPPTGPAEGANSHTTLPQRRRLQKKKAGPGSLELCGLPSQKTASLKKRKKMRVMSNLVEHNGVLESEAGQPQALGSSGTCSSLKKQKLRAESDFVKFDTPFLPKPLFFRRAKSSTATHPPGPAVQLNKTPSSSKKVTFGLNRNMTAEFKKTDKSILVSPTGPSRVAFDPEQKPLHGVLKTPTSSPASSPLVAKKPLTTTPRRRPRAMDFF
SW:ID RRP1B_HUMAN
SW:DE RecName: Full=Ribosomal RNA processing protein 1 homolog B;AltName: Full=RRP1-like protein B;
SW:GN Name=RRP1B; Synonyms=KIAA0179;
SW:KW Acetylation; Alternative splicing; Complete proteome; Nucleus;Phosphoprotein.
SW:EXACT F
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 31->762|RRP1B_HUMAN|0.0|100.0|732/758|
GO:SWS:NREP 1
GO:SWS GO:0005634|"GO:nucleus"|Nucleus|
SEG 4->30|sagcsgtagcaagdapagamapamqpa|
SEG 365->385|gkhkkkgnkllektnlekekg|
SEG 402->410|krrrkkkkk|
SEG 451->465|gaeatsstgeesgse|
SEG 475->485|krkrprkkspr|
SEG 502->518|sqsgpsgshpqgprgsp|
SEG 747->757|pltttprrrpr|
RP:PFM:NREP 1
RP:PFM:REP 34->222|PF05997|8e-45|46.8|188/208|Nop52|
HM:PFM:NREP 2
HM:PFM:REP 31->223|PF05997|3.2e-56|41.5|193/217|Nop52|
HM:PFM:REP 532->571|PF02628|0.00047|37.5|40/301|COX15-CtaA|
GO:PFM:NREP 2
GO:PFM GO:0006364|"GO:rRNA processing"|PF05997|IPR010301|
GO:PFM GO:0030688|"GO:preribosome, small subunit precursor"|PF05997|IPR010301|
OP:NHOMO 201
OP:NHOMOORG 137
OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----11-------11111-----1-1------1-1----------1---1111--1-----1111111111111111111-111111-11111111111111111-1111121114222-122422524F2133412222222--22-131131211111-1111-11311111-11-3---112--11-11111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
DISOP:02AL 1-12,16-25,235-298,310-331,335-693,697-753,759-759|
PSIPRED ccccccccccHHHHcccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccHHccc
//
[GTOP]
