Homo sapiens (cDNA) (huge0)
Gene : KIAA0985
DDBJ : KIAA0985
Swiss-Prot:RP3A_HUMAN RecName: Full=Rabphilin-3A;AltName: Full=Exophilin-1;
Homologs Archaea 0/68 : Bacteria 0/915 : Eukaryota 79/199 : Viruses 0/175 --->[See Alignment]
b.7.1
g.50.1
:697 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 51->172 1zbdB PDBj 3e-59 94.9 %
:BLT:PDB 395->522 2chdA PDBj 7e-70 95.3 %
:BLT:PDB 538->691 2cm6B PDBj 1e-76 100.0 %
:RPS:PDB 53->97 3bc1B PDBj 3e-10 24.4 %
:RPS:PDB 101->146 2db6A PDBj 3e-04 20.5 %
:RPS:PDB 395->522 2chdA PDBj 1e-27 95.3 %
:RPS:PDB 537->691 2cm6A PDBj 1e-38 91.9 %
:RPS:SCOP 51->172 1zbdB g.50.1.1 * 3e-49 91.0 %
:RPS:SCOP 396->512 1a25A b.7.1.2 * 4e-24 33.6 %
:RPS:SCOP 552->682 1a25A b.7.1.2 * 2e-21 32.6 %
:HMM:SCOP 51->173 1zbdB_ g.50.1.1 * 1.1e-33 40.7 %
:HMM:SCOP 396->517 3rpbA_ b.7.1.2 * 1.1e-36 38.0 %
:HMM:SCOP 554->693 3rpbA_ b.7.1.2 * 1.1e-43 33.6 %
:RPS:PFM 11->99 PF02318 * RPH3A_effect_N 2e-28 79.1 %
:RPS:PFM 412->501 PF00168 * C2 9e-16 41.2 %
:RPS:PFM 572->655 PF00168 * C2 8e-09 36.9 %
:HMM:PFM 412->500 PF00168 * C2 1.7e-28 44.0 84/85
:HMM:PFM 570->657 PF00168 * C2 2.7e-24 38.1 84/85
:HMM:PFM 5->99 PF02318 * RPH3A_effect_N 1.9e-44 63.0 92/92
:HMM:PFM 115->133 PF01485 * IBR 0.0002 31.6 19/64
:HMM:PFM 361->392 PF00428 * Ribosomal_60s 0.00058 38.7 31/88
:BLT:SWISS 4->697 RP3A_HUMAN 0.0 100.0 %
:REPEAT 2|397->520|555->676
:SEG
SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA0985
GT:ORG huge0
GT:GENE KIAA0985
GT:PRODUCT KIAA0985
GT:DATABASE huge2038
LENGTH 697
SQ:AASEQ TSTMTDTVFSNSSNRWMYPSDRPLQSNDKEQLQAGWSVHPGGQPDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCTKCGVETNNRLHSVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPVSEPAAPEQPAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSESWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPYSQASAAAPQPAAARQPPPPEEEEEEANSYDSDEATTLGALEFSLLYDQDNSSLQCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERVGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD
SW:ID RP3A_HUMAN
SW:DE RecName: Full=Rabphilin-3A;AltName: Full=Exophilin-1;
SW:GN Name=RPH3A; Synonyms=KIAA0985;
SW:KW Alternative splicing; Cell junction; Complete proteome; Metal-binding;Phosphoprotein; Protein transport; Repeat; Synapse; Transport; Zinc;Zinc-finger.
SW:EXACT F
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 4->697|RP3A_HUMAN|0.0|100.0|694/694|
GO:SWS:NREP 5
GO:SWS GO:0030054|"GO:cell junction"|Cell junction|
GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding|
GO:SWS GO:0015031|"GO:protein transport"|Protein transport|
GO:SWS GO:0045202|"GO:synapse"|Synapse|
GO:SWS GO:0006810|"GO:transport"|Transport|
NREPEAT 1
REPEAT 2|397->520|555->676|
SEG 180->197|pqqpvsepaapeqpapep|
SEG 237->253|rrasearmssssrdses|
SEG 281->311|papgsvqspappqpgqpgtpggsrpgpgpag|
SEG 355->385|psgpysqasaaapqpaaarqppppeeeeeea|
SEG 603->614|kkakhktqikkk|
BL:PDB:NREP 3
BL:PDB:REP 51->172|1zbdB|3e-59|94.9|118/119|
BL:PDB:REP 395->522|2chdA|7e-70|95.3|128/128|
BL:PDB:REP 538->691|2cm6B|1e-76|100.0|148/148|
RP:PDB:NREP 4
RP:PDB:REP 53->97|3bc1B|3e-10|24.4|45/52|
RP:PDB:REP 101->146|2db6A|3e-04|20.5|39/74|
RP:PDB:REP 395->522|2chdA|1e-27|95.3|128/128|
RP:PDB:REP 537->691|2cm6A|1e-38|91.9|149/149|
RP:PFM:NREP 3
RP:PFM:REP 11->99|PF02318|2e-28|79.1|86/89|RPH3A_effect_N|
RP:PFM:REP 412->501|PF00168|9e-16|41.2|85/85|C2|
RP:PFM:REP 572->655|PF00168|8e-09|36.9|80/85|C2|
HM:PFM:NREP 5
HM:PFM:REP 412->500|PF00168|1.7e-28|44.0|84/85|C2|
HM:PFM:REP 570->657|PF00168|2.7e-24|38.1|84/85|C2|
HM:PFM:REP 5->99|PF02318|1.9e-44|63.0|92/92|RPH3A_effect_N|
HM:PFM:REP 115->133|PF01485|0.0002|31.6|19/64|IBR|
HM:PFM:REP 361->392|PF00428|0.00058|38.7|31/88|Ribosomal_60s|
GO:PFM:NREP 4
GO:PFM GO:0005515|"GO:protein binding"|PF02318|IPR003315|
GO:PFM GO:0006886|"GO:intracellular protein transport"|PF02318|IPR003315|
GO:PFM GO:0008270|"GO:zinc ion binding"|PF02318|IPR003315|
GO:PFM GO:0017137|"GO:Rab GTPase binding"|PF02318|IPR003315|
RP:SCP:NREP 3
RP:SCP:REP 51->172|1zbdB|3e-49|91.0|122/124|g.50.1.1|
RP:SCP:REP 396->512|1a25A|4e-24|33.6|113/132|b.7.1.2|
RP:SCP:REP 552->682|1a25A|2e-21|32.6|128/132|b.7.1.2|
HM:SCP:REP 51->173|1zbdB_|1.1e-33|40.7|123/124|g.50.1.1|1/1|FYVE/PHD zinc finger|
HM:SCP:REP 396->517|3rpbA_|1.1e-36|38.0|121/0|b.7.1.2|1/2|C2 domain (Calcium/lipid-binding domain, CaLB)|
HM:SCP:REP 554->693|3rpbA_|1.1e-43|33.6|140/0|b.7.1.2|2/2|C2 domain (Calcium/lipid-binding domain, CaLB)|
OP:NHOMO 2103
OP:NHOMOORG 79
OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----13-------1--------------------------------------------------------------------------------------------1--ViinmiiOIKGLTM**A*O**i7sb*JIHImHQZOGTEGGaGKuHWSYUBD6NIN77UC9OBIO9----61----3122-44----21- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 434
STR:RPRED 62.3
SQ:SECSTR ##################################################ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTcccHHHHHHHHTcccccccccEEcHHHHEEEEEcccccEEcTTTEEEccccTGGGccccccHHHHHHHHHTcHHHHTcccccccccc#####################################################################################################################################################################################################################ccccccHHHTccEEEEEEEccccccEEEEEEEEEEccccccTTccccEEEEEEcTTcHcTTccEEccccccccccEEEEEEEEEccEGGGGcccccEEEEEEccccccccEEEEEEcccTTGGGcccccccccEEcccccTcccTTTTcccccTGGGGccccEcccccccEEEEEEEEETTTTEEEEEEEEEEccccccTTccccEEEEEEEEccTTEEEcccccccccccccEEEEEEEEEccHHHHTTcEEEEEEEEcccccccEEEEEEEEETTccHHHHHHHHHHHHcTTccEEEEEEccccccEccT
DISOP:02AL 1-2,42-57,71-100,155-392,690-698|
PSIPRED ccccEEEEEcccccccccccccccccccHHHcccccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccccccccccEEEccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEcccccccccccccccEEEEEEEEcccccEEEEEEEEccccccccccEEEEEcccHHHHcccEEEEEEEEcccccccccEEEEEEEHHHccHHHcccccccccccccccccccccccccEEEEccccccccccccccccEEEEEEEcccccEEEEEEEEcccccccccccccccEEEEEEEccccEEEEEEcccccccccccccEEEEEEccHHHHcccEEEEEEEEccccccccEEEEEEEccHHcccHHHHHHHHHHccccEEEEEEccccHHHcccc
//
[GTOP]
