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Homo sapiens (cDNA) (huge0)
Gene : KIAA1239
DDBJ      :             KIAA1239
Swiss-Prot:K1239_HUMAN  RecName: Full=Leucine-rich repeat and WD repeat-containing protein KIAA1239;

Homologs  Archaea  2/68 : Bacteria  16/915 : Eukaryota  73/199 : Viruses  0/175   --->[See Alignment]
b.30.5b.69.4b.70.1
:1164 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   382->474 1r5mA PDBj 6e-05 21.7 %
:BLT:PDB   650->894 2co0C PDBj 1e-07 21.0 %
:RPS:PDB   389->1062 3ei3A PDBj 2e-17 10.8 %
:RPS:SCOP  379->528 1k8kC  b.69.4.1 * 4e-06 9.7 %
:RPS:SCOP  505->592 1nkgA3  b.30.5.10 * 5e-22 22.9 %
:RPS:SCOP  652->756 1flgA  b.70.1.1 * 2e-08 13.8 %
:RPS:SCOP  739->987 1nr0A2  b.69.4.1 * 1e-10 17.8 %
:HMM:SCOP  380->726 1gxrA_ b.69.4.1 * 2e-27 19.5 %
:HMM:SCOP  599->859 1erjA_ b.69.4.1 * 3.5e-24 18.9 %
:HMM:SCOP  730->1066 1gxrA_ b.69.4.1 * 5.9e-24 21.1 %
:BLT:SWISS 1->1164 K1239_HUMAN 0.0 100.0 %
:PROS 404->418|PS00678|WD_REPEATS_1

SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA1239 GT:ORG huge0 GT:GENE KIAA1239 GT:PRODUCT KIAA1239 GT:DATABASE huge2038 LENGTH 1164 SQ:AASEQ QVLKHQLLRVKRKVTSGQQIYVNNALSKCTLPMFVNLTFREVRHWRSHKDVDESSLSVTVHESIEQLFWSLEKKCGQKLVSRALGYITMAKMGLSEMELEDVLALDNSVMSELKENTRPSNPLRVPYLYIARLKEGLSGYLIERHVKNVTLLVWANRHLQLIAQKLYLQDDNDLREMHTILADYFLGVWSGGRRKAFCLEDPYLNGCLDLENRSLLEEEKHFMEQASFDRQAPDQPWVFQCNPLEPDIFFVNHRKMSELLYHLTRCGKTDDLLYGIIMNFSWLYTMIKIGQFDKVLSDIELAYNYSQEKELKFLANTLRSIKNKVTAFPGSLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPERLPLSSSHLHVTEILPTCNPSTVLTALENGSISTWDVETRQLLRQITTAQSVILGMKLTSDEKYLVVATTNNTLLIYDNVNSCLLSEVEIKGTKHGSSATYINGFTLSANHALAWLEASKDVTVIDLLYGWPLYQFHCWYEVTCVQCSLDGLYAFCGQYLNTTTIFHLGSGEKLCTVTSEFSGGFVKFLLILDTAQEMVMVDSEGSLSVWNTEDISSPQLTDDFDCRREDSEVVSIELSEDQSAVLICKALSIELLDTGLWKVAEKFRAKHNERFISAVLSKNGDCIIATMENTSAVFFWRRDTGQCMASLQEISGSIVKLVKSSHHNMLLSLSTSGVLSIWDIDIITAMSNIDKTGKPIQSLLLPARGEIIYSLDGSDCVHKWNFSSGFIEAVFKHEGIVEHCVLTSTGDIMVTSDDKSSQYVWHTSSGENLFRINGQRISQLLITHNDQFVVSLCEENASRVWRLATGHRVCNILTTLQNAFITSANTFVVGMTKSKVLAVSLWTGSITKKFCCEDGTTIVNFKLIPDCPDIIVFITSAETVNIWSLTDEVICRRVQLPNNFLKNLEDFEISPNGKLGIIARGDENINVLDLYSGKLRVVHASGIIWRQRLSRDGRYLVYICFRNGEEEDENGAIFSLIVMRLADGKNIGACSLYKTPTFLALSQRHLNIIVGFDDGSIGIYTVVDRVDAALKIKIATSNSRQIFNNATHTSRPKCNSYCFKISVDCLWRESTEVFARDSPITVSDSTESNEATPSKKHNSCYERVCSALEARGHSYAPDN SW:ID K1239_HUMAN SW:DE RecName: Full=Leucine-rich repeat and WD repeat-containing protein KIAA1239; SW:GN Name=KIAA1239; SW:KW Complete proteome; Leucine-rich repeat; Polymorphism; Repeat;WD repeat. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->1164|K1239_HUMAN|0.0|100.0|1164/1742| PROS 404->418|PS00678|WD_REPEATS_1|PDOC00574| BL:PDB:NREP 2 BL:PDB:REP 382->474|1r5mA|6e-05|21.7|92/351| BL:PDB:REP 650->894|2co0C|1e-07|21.0|243/304| RP:PDB:NREP 1 RP:PDB:REP 389->1062|3ei3A|2e-17|10.8|621/1105| RP:SCP:NREP 4 RP:SCP:REP 379->528|1k8kC|4e-06|9.7|148/354|b.69.4.1| RP:SCP:REP 505->592|1nkgA3|5e-22|22.9|83/250|b.30.5.10| RP:SCP:REP 652->756|1flgA|2e-08|13.8|94/582|b.70.1.1| RP:SCP:REP 739->987|1nr0A2|1e-10|17.8|247/299|b.69.4.1| HM:SCP:REP 380->726|1gxrA_|2e-27|19.5|292/0|b.69.4.1|1/2|WD40 repeat-like| HM:SCP:REP 599->859|1erjA_|3.5e-24|18.9|259/0|b.69.4.1|2/3|WD40 repeat-like| HM:SCP:REP 730->1066|1gxrA_|5.9e-24|21.1|318/0|b.69.4.1|2/2|WD40 repeat-like| OP:NHOMO 225 OP:NHOMOORG 91 OP:PATTERN --------------------------------------------------22---------------- ---------------------------------------------------------------------------------------------------------------------------------1------1---1-----A24---1-------------14382-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------12-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----13------------111-----------1-1-------------5--12-----------------------------------------9-------1-1----A432-321-11-213122-58213-1122222132-22122--2211132--3I71111111156------------113-1------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 723 STR:RPRED 62.1 SQ:SECSTR ###########################################################################################################################################################################################################################################################################################################################################################ccccccEEccccEEEEEccEEEEETTcccccccEEEEEccccccccEEEEEEETTTEEEEEEcccEEEEEcccccEEEEEccTcccccEEEEcccEEEEEETTEEEEEEEETTEEEEEEEETTEccccEEEEEcccccccTTccEEEEEETTTTEEEEEETTTccEEEEEEccEEEEEEEEETTEEEEEEEETTcEEEEEEEcTTTccEEEEEEEEccccccEcccEEEEEccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEcccccTTEEEEEccccEEEEEEcccccEEEEEEEcccEEEEEEEEGGGTEEEEEEEEEEEEcccccEEEccHHHHccEEEEcccEEcccccccccEEEEEEEEEEETTEEEEEccTTEEEEEEEEEccTTccccEEEccccEEEEEEEEETTEEEEEEEEEEcccEEEEEEETTEEEEEETTEEEEEEEEcTTccEEEEEEccccEEEEEEETTEEEEEEccccEEEEEEETTTTGGGHcTTcccEccccccccccEETTEEEEEEEccccccEEEEEEEETTEEEEETTETTcEEEEEEEcTTcccTTGGGcEEEEEEEEccccEEEEEEcccccccEEEEEEEEETTccEEEEEEEcHHHHHHHHHHHHHHHcccTTcccHHHHHcEEccccccccTccEEccccEEEHHHHHccEEEEEEGGGGccHHHHHHHccccccHHEEEEEccH############################################################################################## DISOP:02AL 5-5,7-7,219-229,1128-1143,1157-1165| PSIPRED cHHHHHHHHccccccHHHHHHHHHHHHHccccEEHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccHHHcccEEEEEccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccccccccHHHcccccccccccccHHHcccHHHccccccccccEEEccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccEEEEEccccccccccEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccccEEEEEcccEEEccccEEEEEEcccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccccccEEEEEEEccccccEEEEEEcccccEEEEEcccEEEEEEcccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEcccEEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEccccEEEEEcccEEEEEEccccEEEEEEEcccEEEEEEcccccEEEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEcccccEEEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEcccEEEEEEEcccEEccEEEEEEccccccccccccEEcccccccEEcccEEEEEcccccccccccEEEEEEcccccccccccccccccHHHHHHHHHcccccccccc //