Homo sapiens (cDNA) (huge0)
Gene : KIAA1795
DDBJ : KIAA1795
Swiss-Prot:LCOR_HUMAN RecName: Full=Ligand-dependent corepressor; Short=LCoR;AltName: Full=Mblk1-related protein 2;
Homologs Archaea 0/68 : Bacteria 0/915 : Eukaryota 48/199 : Viruses 0/175 --->[See Alignment]
a.4.1
c.66.1
:572 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 485->531 2cobA PDBj 4e-14 100.0 %
:RPS:PDB 482->531 2cobA PDBj 6e-16 76.0 %
:RPS:SCOP 103->143 2bzgA1 c.66.1.36 * 8e-04 4.9 %
:RPS:SCOP 482->531 2cobA1 a.4.1.15 * 1e-19 76.0 %
:HMM:SCOP 482->544 2cobA1 a.4.1.15 * 1.2e-14 41.3 %
:HMM:PFM 490->533 PF05225 * HTH_psq 2.1e-17 46.5 43/45
:BLT:SWISS 140->572 LCOR_HUMAN 0.0 100.0 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links HUGE Abbreviations Back to title page
GT:ID KIAA1795
GT:ORG huge0
GT:GENE KIAA1795
GT:PRODUCT KIAA1795
GT:DATABASE huge2038
LENGTH 572
SQ:AASEQ SSTHGSRFPLCGGRRDHKGLTHIFNPPPKRFESILEGLFGPALLKDLSLFKDCEPESISDWTFDENCLFCCLRRDKVKGHLVGLDEPASGAGQEALLKQEQAKIIRFERQAEEFLNAVFYRKDSPWVSDPNIPLVAREIMQRMIQQFAAEYTSKNSSTQDPSQPNSTKNQSLPKASPVTTSPTAATTQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSLSHSPGCSSTQGNGRPGRPSQYRPDGLRSGDGVPPRSLQDGTREGFGHSTSLKVPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMKFRGNGALSNISDLPFLAENSAFPKMALQAKQDGKKDVSHSSPVDLKIPQVRGMDLSWESRTGDQYSYSSLVMGSQTESALSKKLRAILPKQSRKSMLDAGPDSWGSDAEQSTSGQPYPTSDQEGDPGSKQPRKKRGRYRQYNSEILEEAISVVMSGKMSVSKAQSIYGIPHSTLEYKVKERLGTLKNPPKKKMKLMRSEGPDVSVKIELDPQGEAAQSANESKNE
SW:ID LCOR_HUMAN
SW:DE RecName: Full=Ligand-dependent corepressor; Short=LCoR;AltName: Full=Mblk1-related protein 2;
SW:GN Name=LCOR; Synonyms=KIAA1795, MLR2;
SW:KW 3D-structure; Activator; Alternative splicing; Complete proteome;DNA-binding; Nucleus; Phosphoprotein; Repressor; Transcription;Transcription regulation.
SW:EXACT F
SW:FUNC +
BL:SWS:NREP 1
BL:SWS:REP 140->572|LCOR_HUMAN|0.0|100.0|433/433|
GO:SWS:NREP 4
GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding|
GO:SWS GO:0005634|"GO:nucleus"|Nucleus|
GO:SWS GO:0006350|"GO:transcription"|Transcription|
GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation|
SEG 175->187|aspvttsptaatt|
SEG 498->509|svvmsgkmsvsk|
SEG 532->543|lknppkkkmklm|
BL:PDB:NREP 1
BL:PDB:REP 485->531|2cobA|4e-14|100.0|47/70|
RP:PDB:NREP 1
RP:PDB:REP 482->531|2cobA|6e-16|76.0|50/70|
HM:PFM:NREP 1
HM:PFM:REP 490->533|PF05225|2.1e-17|46.5|43/45|HTH_psq|
RP:SCP:NREP 2
RP:SCP:REP 103->143|2bzgA1|8e-04|4.9|41/229|c.66.1.36|
RP:SCP:REP 482->531|2cobA1|1e-19|76.0|50/63|a.4.1.15|
HM:SCP:REP 482->544|2cobA1|1.2e-14|41.3|63/0|a.4.1.15|1/1|Homeodomain-like|
OP:NHOMO 133
OP:NHOMOORG 48
OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------13262342212131742217E2133622225-222221223222-4222-----1---------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 50
STR:RPRED 8.7
SQ:SECSTR #################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################ccccccccHHHHHHHHHHHHTTcccHHHHHHHHTccHHHHHHHHHHHTTT#########################################
DISOP:02AL 1-5,8-8,81-100,154-171,210-219,230-263,309-318,345-354,373-388,402-432,461-487,530-541,555-573|
PSIPRED ccccccccccccccccccccHHHcccccccHHHHHHHHccHHHHccccccccccHHHcccccccccEEEEEccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHccccccccccccccccccEEEEccHHHHHHcccccccccccccccccccccEEEEccccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccccHHccccccEEEEccEEEEcccccccccccccccccccccccccHHHHHHHHHccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccEEEEEEccccccccccHHHHHHHHHHcHHccccccccccccccccccEEEEEccHHHcccccccccccc
//
[GTOP]
