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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK85849.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1c.52.1
:1061 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  366->797 1w36C2  c.37.1.19 * 4e-31 15.1 %
:RPS:SCOP  774->1002 1w36B3  c.52.1.24 * 3e-21 15.7 %
:HMM:SCOP  360->730 1w36C2 c.37.1.19 * 2.5e-39 23.9 %
:RPS:PFM   862->929 PF01930 * Cas_Cas4 2e-04 28.4 %
:BLT:SWISS 580->965 Y584_RICBR 2e-27 25.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85849.1 GT:GENE AAK85849.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(23586..26771) GB:FROM 23586 GB:TO 26771 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK85849.1 GB:DB_XREF GI:15154886 LENGTH 1061 SQ:AASEQ MTLTHHAKRVLTIAAGTPFLKTLAETLCDGRLTAGYRYDPTDPLSLASVTIYVPTRRSARVLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDIENPEIMDLAPPISGTGRQIELARLILAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALGEVIDAMDTEEKDWEALQHLDTGEHAQWWQLTADFLKIASVFWPARLAELNRSSAGRHRNAILRAEADRLANLPDTGPIIVAGSTGSIPAAADLIAAVAALPQGTVVLPGLDLAMPEEQWQAIIEDPTDPSSRTHPQYGLYMLLQKLGMSRDEVVQIGALDRDLEKRAAVFSAALAPAKSTSDWNGWREGRDPGFFDEAFAAATLIEAANQREEATAIAVALRLALEAPGPGRPSQAALITPDRGLARRVATELQRFGIEADDSAGTPLSATPQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSGDAFTKASKALELIALRGGRVETEIGNLEVVLDAQLLAQRDNRHPPAWRVALPEGSVDAARDLARRIAIATEPLGSAFIRRDRSGRAFTDKLPLSDWAGRTGRVIEAICADDSNDLAALWSGEAGDKLSSLFAELMESGDILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEGLWPGQTANNPFLSRSMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYTRALRQGSTPAVASRWLQRLLALGGENFAEQLRKRGETYRHWAGLMDESIDQETAKRPAPKPPADLQPKSYSFSEVGRLRRDPYAIYARRILKLDPLDPFNRDPNAADRGTLYHGIIERYSREGHIPGTPASLEAMQRILDDCFDAENLPVHVDVIWRPRFAAVARAFIDWEKERHPSIRRSFFEARAGQEIAEAGIRLTGVADRIDIKTSGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFRETGSPTPENLIYVRLRPGDRFFADQVNNEHSNRSGKRPPKSAIELATESIDQLAKFVRSLRDGENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD GT:EXON 1|1-1061:0| BL:SWS:NREP 1 BL:SWS:REP 580->965|Y584_RICBR|2e-27|25.0|376/832| SEG 244->258|ipaaadliaavaalp| SEG 355->365|afaaatlieaa| SEG 522->534|daardlarriaia| RP:PFM:NREP 1 RP:PFM:REP 862->929|PF01930|2e-04|28.4|67/158|Cas_Cas4| RP:SCP:NREP 2 RP:SCP:REP 366->797|1w36C2|4e-31|15.1|418/470|c.37.1.19| RP:SCP:REP 774->1002|1w36B3|3e-21|15.7|223/276|c.52.1.24| HM:SCP:REP 360->730|1w36C2|2.5e-39|23.9|348/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 123 OP:NHOMOORG 123 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111---11111--111111111111111111--11111------------------------------1-1--111------------1-----------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 623-633, 713-717, 985-998, 1051-1061| PSIPRED cccEEEccEEEEEcccccHHHHHHHHHHHccccccccccccccHHHcccEEEEccHHHHHHHHHHHHHHcccccEEccEEEEcccccHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHcccccccHHHHHccccccEEEEcccHHHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccEEEEccHHHccccccEEEEEEcccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHccccccccccccccccHHHccccccHHHHHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccEEEEEEEEEEEEcccccEEEEEEcccccccHHHHHccccHHHHHHHHHHHHcccccccccccEEEEEEEEEccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccHHHHHHHHHHHcccccccccc //