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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK85896.1
DDBJ      :             D-isomer specific 2-hydroxyacid dehydrogenases family protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  786/915 : Eukaryota  189/199 : Viruses  1/175   --->[See Alignment]
c.2.1c.23.12c.91.1
:334 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->329 2dbrA PDBj 4e-60 39.9 %
:RPS:PDB   5->330 3ba1A PDBj 1e-81 36.5 %
:RPS:SCOP  60->332 1aq2A1  c.91.1.1 * 7e-45 13.1 %
:HMM:SCOP  6->142 1gdhA2 c.23.12.1 * 5e-38 39.5 %
:HMM:SCOP  105->299 1gdhA1 c.2.1.4 * 1.7e-55 46.0 %
:RPS:PFM   28->328 PF00389 * 2-Hacid_dh 2e-37 36.9 %
:HMM:PFM   114->298 PF02826 * 2-Hacid_dh_C 1e-57 44.4 178/178  
:BLT:SWISS 6->329 GYAR_THEON 4e-67 44.3 %
:PROS 156->183|PS00065|D_2_HYDROXYACID_DH_1
:PROS 235->251|PS00671|D_2_HYDROXYACID_DH_3

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85896.1 GT:GENE AAK85896.1 GT:PRODUCT D-isomer specific 2-hydroxyacid dehydrogenases family protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(79181..80185) GB:FROM 79181 GB:TO 80185 GB:DIRECTION - GB:PRODUCT D-isomer specific 2-hydroxyacid dehydrogenases family protein GB:PROTEIN_ID AAK85896.1 GB:DB_XREF GI:15154941 LENGTH 334 SQ:AASEQ MTHKKRPTVYITRKLPDVVETRMRELFDAELNIDDSPRSEEELVAAMQRVDVLVPTVTDRITAAMIEKAGPQLKLIASFSNGIDHVDVDAAARKGITVTNTPNVLTEDSADITMALVLAVPRRMIEGTRVLANGADEWLGWSPTWMLGRRISGKRIGIVGMGRIGTAVARRAKAFGLSIHYHNRKRVNPATEAELEATYWDSLDQMLARVDIVSVNCPSTPATYHLISARRLALMQPTSYIVNTARGDIIDEAAMIQCLREGKIAGAGLDVYENEPQVNPKLIKLAKEGKVVLLPHMGSATIEGRIEMGDKVIINIRTLFDGHRPPNRVLPGRN GT:EXON 1|1-334:0| BL:SWS:NREP 1 BL:SWS:REP 6->329|GYAR_THEON|4e-67|44.3|316/334| PROS 156->183|PS00065|D_2_HYDROXYACID_DH_1|PDOC00063| PROS 235->251|PS00671|D_2_HYDROXYACID_DH_3|PDOC00063| BL:PDB:NREP 1 BL:PDB:REP 6->329|2dbrA|4e-60|39.9|316/333| RP:PDB:NREP 1 RP:PDB:REP 5->330|3ba1A|1e-81|36.5|312/312| RP:PFM:NREP 1 RP:PFM:REP 28->328|PF00389|2e-37|36.9|290/300|2-Hacid_dh| HM:PFM:NREP 1 HM:PFM:REP 114->298|PF02826|1e-57|44.4|178/178|2-Hacid_dh_C| GO:PFM:NREP 3 GO:PFM GO:0008152|"GO:metabolic process"|PF00389|IPR006139| GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF00389|IPR006139| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00389|IPR006139| RP:SCP:NREP 1 RP:SCP:REP 60->332|1aq2A1|7e-45|13.1|252/310|c.91.1.1| HM:SCP:REP 6->142|1gdhA2|5e-38|39.5|129/130|c.23.12.1|1/1|Formate/glycerate dehydrogenase catalytic domain-like| HM:SCP:REP 105->299|1gdhA1|1.7e-55|46.0|187/191|c.2.1.4|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 4718 OP:NHOMOORG 1043 OP:PATTERN 33211131111111113322211252233361111111222212121112221233333332122-22 2371821133311345522-241149222224344423BA241354311222696321--43323685B823222333113232233344441533---23424444724-----------------1311--12-333551112323124422122111111232233421111112211223223344222333333333333333343543333324447121112122337777777777777785576325544471215544351327972223331-----------------1----111111-1211111111136167444444424323553222432114334156111132128842-332146334-1--167CDA3256978544444443447-7877866CD95-CBB5869DA8CFB844154787898362222222245521333-----------------------------2337334865A9BBAB73444499E9666656D7E9DDA-476555587A5D4AA54212--22112222244212133331--23112222232332347333324242222222222222222222222332226675733344455545454544444454441-12334------55664535556576745-55567665655755555557C85632455555555555555559665444511666666666666--2222222444324468222334-3323322233433362339366667AAA6A9AB5978112123111333346566555666333333333411112213222222--------11-------1---2------11------3243324222232 ----373-63--3529AC9AAB9DAC97866777785B99A9A767967AEGJK9CB88777E4633425455465646788889B33-8E6A674CAB9616556-3A4CA9AAA632134435E3D4AX7-6692433A43641343152254B58A45825835E58822863864t45549HENO9A966HAHG5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 332 STR:RPRED 99.4 SQ:SECSTR ##cTcccEEEEcccccHHHHHHHHHHcEEEEGGGccccHHHHHHHHTTTEEEEEEcccccccHHHHHHcHTTccEEEEcccccTTccHHHHHHHTcEEEccccTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTHHGGGGccTTcccccccTTccEEEEcccHHHHHHHHHHHTTTccEEEEcccccccHHcTTcccEEEccHHHHHHTccEEEEcccccGGGTTcccHHHHHHHcTTcEEEEcccGGGccHHHHHHHHHHTcccEEEEcccTTTTcccGGGGGcTTccTEEEccccTTccHHHHHHHHHHHHHHHHHHHHTccccccccTTHc DISOP:02AL 1-4, 333-334| PSIPRED cccccccEEEEEccccHHHHHHHHHHccEEEEEccccccHHHHHHHHccccEEEEcccccccHHHHHHHccccEEEEEEccccccccHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEccHHHHHHHHHHHHcccEEEEEccccccccHHHHcccEEcccHHHHHHHccEEEEEccccHHHHHHccHHHHHHcccccEEEEccccccccHHHHHHHHHcccEEEEEEEcccccccccccccHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccc //