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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK85938.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  214/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:501 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   42->429 PF01970 * TctA 3e-79 46.1 %
:HMM:PFM   19->438 PF01970 * TctA 6.9e-156 49.2 419/419  
:BLT:SWISS 1->472 YZ2R_AGRVI e-121 54.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85938.1 GT:GENE AAK85938.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 122483..123988 GB:FROM 122483 GB:TO 123988 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK85938.1 GB:DB_XREF GI:15154991 LENGTH 501 SQ:AASEQ MDLLNNLALGFVTASSLANLFFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSSLIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGKAGAALAIAAIGSFFAGTVSTFLVAIFAPPLTAIALEFGAAEYFSLMVVGLVSSIALAHGSIVKALAMVVLGLLLGLVGTDIYSGTPRFTLGIREYADGLNFVAVAVGVFGIAEILRNLENERTRSVLIAKVSSLMPSKEDFKAMIGPVLRGTAIGSALGILPGGGAILAAFASYTVEKRVSKNPEEFGHGAVAGVAGPESANNAGAQTSFIPLLTLGIPANPVMALMIGAMIIQGIVPGPNVATEQPALFWGIIASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCAIGVYSVNSNVFDLYAVAFFGFIGYVLVKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFVTRPISATLLFIALAVLIIVFLPSVKKKREEVFVEED GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 1->472|YZ2R_AGRVI|e-121|54.2|472/502| TM:NTM 12 TM:REGION 3->25| TM:REGION 32->54| TM:REGION 61->83| TM:REGION 107->129| TM:REGION 136->158| TM:REGION 164->186| TM:REGION 200->222| TM:REGION 253->275| TM:REGION 316->338| TM:REGION 367->389| TM:REGION 407->428| TM:REGION 467->488| SEG 24->40|ligvllgtligvlpgig| SEG 101->121|arkgkagaalaiaaigsffag| SEG 173->183|vvlglllglvg| SEG 206->215|fvavavgvfg| SEG 258->275|aigsalgilpgggailaa| SEG 435->446|plllgfvlgpll| SEG 473->486|llfialavliivfl| SEG 489->500|vkkkreevfvee| RP:PFM:NREP 1 RP:PFM:REP 42->429|PF01970|3e-79|46.1|388/420|TctA| HM:PFM:NREP 1 HM:PFM:REP 19->438|PF01970|6.9e-156|49.2|419/419|TctA| OP:NHOMO 439 OP:NHOMOORG 216 OP:PATTERN -------------------------------------------------------------------- --------111----------1---2------1111--12----1-------132-1-------212-111-----------2-----------------------------------------------------111--------------------------------------------31---11-------------------6111-------114--------3--------------------------------------------------------------------------------------------4---------------------1----1----55-----1-------1---------------733--822232----------4-21111---D---133222932254221--6653-46425--------------1------------------------------1-----24425-----------------------54455111112242232418336------------------1----12-1-1----2----------1111----1--------1-----------------11--1-----1-1111----11---------------------1111------1-111-------111-1--1-11-113-----11211111111111111111------------------------------------189---1-2--------1--------1-2-222212112111111-1----------1-121111111112-----------------1------------------------------------------------3------ -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 222-241, 285-292, 493-501| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //