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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK85955.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  110/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.50.1
:178 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   72->164 1b11A PDBj 3e-09 20.4 %
:RPS:SCOP  72->164 1nsoA  b.50.1.1 * 3e-11 16.9 %
:HMM:SCOP  59->167 4fivA_ b.50.1.1 * 1.1e-15 31.4 %
:RPS:PFM   75->163 PF09668 * Asp_protease 2e-04 29.9 %
:HMM:PFM   72->165 PF00077 * RVP 1.2e-07 26.1 88/100  
:BLT:SWISS 67->176 YCBV_PSEDE 1e-16 38.2 %
:PROS 82->93|PS00141|ASP_PROTEASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85955.2 GT:GENE AAK85955.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(137938..138474) GB:FROM 137938 GB:TO 138474 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK85955.2 GB:DB_XREF GI:159139508 LENGTH 178 SQ:AASEQ MRSNHLLARAIFLLVGLSVSATQIPALMEKFQPHPETGAAKSGATAEASRPQPVSLGSVSLKADERGHFNATFRINGKSFDGLVDTGASMVAINETMARRLGYGVNSLDFKYAISTANGQTLAAHVKLDRVEIGAIRVQNVDTMVLKDNALSNMLVGMSFLKQLSSFKVSGGEMRLVR GT:EXON 1|1-178:0| BL:SWS:NREP 1 BL:SWS:REP 67->176|YCBV_PSEDE|1e-16|38.2|110/233| PROS 82->93|PS00141|ASP_PROTEASE|PDOC00128| RP:PDB:NREP 1 RP:PDB:REP 72->164|1b11A|3e-09|20.4|93/113| RP:PFM:NREP 1 RP:PFM:REP 75->163|PF09668|2e-04|29.9|87/114|Asp_protease| HM:PFM:NREP 1 HM:PFM:REP 72->165|PF00077|1.2e-07|26.1|88/100|RVP| GO:PFM:NREP 2 GO:PFM GO:0004190|"GO:aspartic-type endopeptidase activity"|PF09668|IPR019103| GO:PFM GO:0006508|"GO:proteolysis"|PF09668|IPR019103| RP:SCP:NREP 1 RP:SCP:REP 72->164|1nsoA|3e-11|16.9|89/107|b.50.1.1| HM:SCP:REP 59->167|4fivA_|1.1e-15|31.4|105/113|b.50.1.1|1/1|Acid proteases| OP:NHOMO 140 OP:NHOMOORG 110 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111-------2221122222211-11111112-11211312121-22222222221111111111-----11----------------111-----------11-----1-----------1---------------------------------------111111---11111-222------------111-1------------------------------------------------------------1-1-1----------------------------1--------------------------------------------------------------------------------------------------1111--1----------------------------11111111-111112111----------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 107 STR:RPRED 60.1 SQ:SECSTR #######################################################################EEEETTEEEEEEEcTTccccEEEGGGcccTTcEEEEEEEEEccccEEEEEEEEEEEEEEccTTcccEEEEEEEEETTccccccEEcHHHHHHHEEEEEEccccEEEE DISOP:02AL 1-5,46-46,48-50,52-52| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEEEcccccccEEEEEEEEccccEEEEEEEEccEEEEEEEEcccccEEccHHHHHHcccEEEcccccEEEEccccEEEEEEEEEEEEEEccEEEEcEEEEEEcccccccEEEcHHHHHccccEEEEccEEEEEc //