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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86015.2
DDBJ      :             ABC transporter, membrane spanning protein (proline/glycine/betaine)
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  499/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:246 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->208 2r6gG PDBj 5e-04 27.2 %
:RPS:PDB   143->180 3dhwA PDBj 5e-11 34.2 %
:RPS:SCOP  92->214 2r6gG1  f.58.1.1 * 1e-10 18.7 %
:RPS:PFM   112->185 PF00528 * BPD_transp_1 3e-05 33.8 %
:HMM:PFM   88->229 PF00528 * BPD_transp_1 9.8e-21 28.2 142/185  
:HMM:PFM   53->98 PF10233 * Cg6151-P 0.00099 23.9 46/113  
:BLT:SWISS 29->214 YEHW_ECOLI 5e-34 41.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86015.2 GT:GENE AAK86015.2 GT:PRODUCT ABC transporter, membrane spanning protein (proline/glycine/betaine) GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(200281..201021) GB:FROM 200281 GB:TO 201021 GB:DIRECTION - GB:PRODUCT ABC transporter, membrane spanning protein (proline/glycine/betaine) GB:PROTEIN_ID AAK86015.2 GB:DB_XREF GI:159139534 LENGTH 246 SQ:AASEQ MKNAFSFLSLGLLVLALIIFLAAPQIFAPIFRPLVQANAPAIYTQANLFSLTLSHLTIVAIATGLATLTAGALAVLVTRPFGADFLPLSRSIVNIGQTFPPVAVLALAVPMIGFGEKPTLIALFLYALLPVFENTLTGLTTLPATVMDAARGSGMTGWQRLTKVELPLALPAILAGVRLSAVISLSTATIGSTVAARTLGEVIIAGLQSNNLAFILQGGLIVAALAILIHAGFSALERSAARKTGH GT:EXON 1|1-246:0| BL:SWS:NREP 1 BL:SWS:REP 29->214|YEHW_ECOLI|5e-34|41.4|186/243| TM:NTM 6 TM:REGION 10->32| TM:REGION 53->75| TM:REGION 96->117| TM:REGION 122->144| TM:REGION 162->184| TM:REGION 216->238| SEG 4->23|afsflslgllvlaliiflaa| SEG 56->78|ltivaiatglatltagalavlvt| SEG 215->232|ilqgglivaalailihag| BL:PDB:NREP 1 BL:PDB:REP 121->208|2r6gG|5e-04|27.2|81/284| RP:PDB:NREP 1 RP:PDB:REP 143->180|3dhwA|5e-11|34.2|38/203| RP:PFM:NREP 1 RP:PFM:REP 112->185|PF00528|3e-05|33.8|74/195|BPD_transp_1| HM:PFM:NREP 2 HM:PFM:REP 88->229|PF00528|9.8e-21|28.2|142/185|BPD_transp_1| HM:PFM:REP 53->98|PF10233|0.00099|23.9|46/113|Cg6151-P| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 92->214|2r6gG1|1e-10|18.7|123/284|f.58.1.1| OP:NHOMO 1216 OP:NHOMOORG 519 OP:PATTERN -----------------------2--------1--1-1111111211--3113-------2------- 1-1-111---1-3-2------3--23-----213334354-3-1-31211112--122--33--323745----------1-4-----1111-2-----------1-11---------------------------11121---212-11---22--1---1----121-1-1-----1----222-------63333333313333335-3346333212242133333321333333333333333355333-31341-1-122--4441312-112444221214411111111111222222222222221122-1112-113211111111111222111112---2----2211-123-21----11--12--1------12111112213144444444444-331223-344118772448746871---111722113-3--------1---1-13-----------------------------21-1--211113554444333233223333236243533--112--2112-4236-------4------------1-112113111-2111----------1-1131---11------------------------11----1---3----------------------111-------5512-422222222222-2322222222222332334232111114434444444444444422222221-244444424444----11111------45-----11-----------------111-4444555435544-544-----------111-----22311--11111111-------------------1-1------------------------------2---------- -------------1-----------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 81 STR:RPRED 32.9 SQ:SECSTR ########################################################################################################################THHHHHHHHHHHT#######TccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGG###################################### DISOP:02AL 1-2,245-247| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //