[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86100.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  73/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.69.9d.2.1
:364 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->245 1qusA PDBj 3e-04 35.2 %
:RPS:PDB   117->203 2dsoE PDBj 6e-05 17.3 %
:RPS:SCOP  121->246 1d0kA  d.2.1.6 * 1e-13 34.9 %
:HMM:SCOP  47->330 1k32A3 b.69.9.1 * 3.4e-14 21.0 %
:RPS:PFM   70->362 PF07433 * DUF1513 8e-68 44.3 %
:HMM:PFM   69->362 PF07433 * DUF1513 2.8e-111 48.3 294/305  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86100.1 GT:GENE AAK86100.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(278400..279494) GB:FROM 278400 GB:TO 279494 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86100.1 GB:DB_XREF GI:15155181 LENGTH 364 SQ:AASEQ MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSERGEIIDRVALPARAHGMATSHATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFYGHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGEYDAHGVGTHDMTVSDDGRLIVIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDNGRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGLTSPSGNAAVTLDAKTGSVVSEVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIVRLSG GT:EXON 1|1-364:0| SEG 321->339|evtvreaagvataaggiav| BL:PDB:NREP 1 BL:PDB:REP 121->245|1qusA|3e-04|35.2|105/312| RP:PDB:NREP 1 RP:PDB:REP 117->203|2dsoE|6e-05|17.3|81/321| RP:PFM:NREP 1 RP:PFM:REP 70->362|PF07433|8e-68|44.3|291/304|DUF1513| HM:PFM:NREP 1 HM:PFM:REP 69->362|PF07433|2.8e-111|48.3|294/305|DUF1513| RP:SCP:NREP 1 RP:SCP:REP 121->246|1d0kA|1e-13|34.9|106/318|d.2.1.6| HM:SCP:REP 47->330|1k32A3|3.4e-14|21.0|262/0|b.69.9.1|1/1|Tricorn protease domain 2| OP:NHOMO 73 OP:NHOMOORG 73 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--11111111111111---11-1111111----------------------------------------------------1111---------------------------------111--11-------------------------1---------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------11-1----------------------1111-11111111111111111----------111-1111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 193 STR:RPRED 53.0 SQ:SECSTR ######################################cccccccc#cTTccc#ccHHHHHHHHHHTHHHHcTTccccccccccHHHHHHHcHHHHHHHHHH##ccTTccccTTTTEEEEccccEcTTccEEEEETTTGGGGGcEEEEEcTTTcHcEEEEEEcccccEEEEEEcTTccEEEEEcTTcccccEEEEEcTTcccc########HHTTcEEccccTTcc##EEEEEEEEccccEEEEE####################################################################################################################### DISOP:02AL 1-5| PSIPRED cccccEEEEEEHHHHHHHHHHHHHHHHHcccHHHHcccccEEEEEEEccccEEEEEEEcccccEEEEcccccccccccccccccEEEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEEEcccccEEEEEccccccccEEEEEEEccccEEEEEEccccccccEEEEEcccccEEEEEccccccccccccccccHHHccccEEEEEcccccEEEEEEccHHHcccEEEEEEEcccccEEEEEEccccccccccEEEEEccccccccccccHHHHHHHcccEEEEEEcccccEEEEEcccccEEEEEEcccccEEcccccccEEcEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHcc //