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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86178.2
DDBJ      :             transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  122/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.35.1
:139 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->74 2b5aC PDBj 2e-05 30.5 %
:RPS:PDB   15->76 2axuG PDBj 2e-13 23.3 %
:RPS:SCOP  8->74 1y7yA1  a.35.1.3 * 1e-12 23.9 %
:HMM:SCOP  3->94 1rioA_ a.35.1.2 * 2.8e-27 42.4 %
:HMM:PFM   19->72 PF01381 * HTH_3 3.8e-14 29.6 54/55  
:BLT:SWISS 1->139 Y410_RHIME 2e-63 87.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86178.2 GT:GENE AAK86178.2 GT:PRODUCT transcriptional regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 355747..356166 GB:FROM 355747 GB:TO 356166 GB:DIRECTION + GB:PRODUCT transcriptional regulator GB:PROTEIN_ID AAK86178.2 GB:DB_XREF GI:159139603 LENGTH 139 SQ:AASEQ MTENKKKPNPIDIHVGSRIRLRRTMLGMSQEKLGESLGITFQQIQKYEKGTNRVGASRLQNISGILNVPVSFFFEDAPGDQVGGTSGMAEASSSNYVVDFLSSAEGLQLNRAFVKIADPKVRRRLVDLVKALAAEGDAE GT:EXON 1|1-139:0| BL:SWS:NREP 1 BL:SWS:REP 1->139|Y410_RHIME|2e-63|87.1|139/139| BL:PDB:NREP 1 BL:PDB:REP 16->74|2b5aC|2e-05|30.5|59/76| RP:PDB:NREP 1 RP:PDB:REP 15->76|2axuG|2e-13|23.3|60/299| HM:PFM:NREP 1 HM:PFM:REP 19->72|PF01381|3.8e-14|29.6|54/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 8->74|1y7yA1|1e-12|23.9|67/69|a.35.1.3| HM:SCP:REP 3->94|1rioA_|2.8e-27|42.4|92/0|a.35.1.2|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 305 OP:NHOMOORG 123 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A5571H91N112221111111111111111111-45352454121192257975553212244111111122222222222111128451111111111111122111111111----1---------------------------------------------------------------------1----------------------11---1---------------------------------------------------------------------------------1----------------------------------------11------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------- STR:NPRED 83 STR:RPRED 59.7 SQ:SECSTR cccHcccHHHHHHcHHHHHHHHHHHHTccHHHHcTHTTTcHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHTTTTcccH######################################################## DISOP:02AL 1-6,8-9,78-98,135-140| PSIPRED cccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccccccccccccccccccccHHHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccc //