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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86182.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  360/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:410 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   102->147 2i1kA PDBj 4e-04 34.8 %
:RPS:PDB   151->323 3biqA PDBj 6e-14 9.2 %
:RPS:PFM   93->319 PF02646 * RmuC 1e-31 35.2 %
:HMM:PFM   99->385 PF02646 * RmuC 3.8e-90 34.6 286/305  
:HMM:PFM   75->110 PF06825 * HSBP1 0.00044 25.0 36/54  
:BLT:SWISS 98->322 RMUC_VIBCH 3e-17 29.4 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86182.1 GT:GENE AAK86182.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(359503..360735) GB:FROM 359503 GB:TO 360735 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86182.1 GB:DB_XREF GI:15155277 LENGTH 410 SQ:AASEQ MIFRITGNLLDLIMNIDFSVLLNPALRAGSVDISFGALLVALVLGLTITWLVTTNRTRKAGADSEISDLLKTQSELHGRIAAMAETLGTRQTEMSQTLNQRLDGMSQRLGETLTEQTRSTHENLSRLQERLAVIDAAQGNIQDLAKDVVGLQAILSNKQTRGAFGQARMETLIADALPAGAFQLQPTLSNGYRPDCIIKMPNNAPALVIDAKFPLEAWNAIKADETPETKRAAVQQFRRDMEVHIRDVAEKYLIRGETQDTAFIFVPSESIFADIHQHFEYLVQRAHRARVVIVSPSLLMLSVQVIQSVLKDQRMREQAHLIQGEVALLMDDVRRLDDRTRKLQAHFGLAQKDVDMMLISSDKVLARGQKIEGLDFSPTEKEASHGEIEQTRRFAENRAGAAKLRVVDDE GT:EXON 1|1-410:0| BL:SWS:NREP 1 BL:SWS:REP 98->322|RMUC_VIBCH|3e-17|29.4|211/513| COIL:NAA 2 COIL:NSEG 1 COIL:REGION 326->327| TM:NTM 2 TM:REGION 3->25| TM:REGION 32->54| SEG 36->46|gallvalvlgl| SEG 328->343|llmddvrrlddrtrkl| BL:PDB:NREP 1 BL:PDB:REP 102->147|2i1kA|4e-04|34.8|46/545| RP:PDB:NREP 1 RP:PDB:REP 151->323|3biqA|6e-14|9.2|173/441| RP:PFM:NREP 1 RP:PFM:REP 93->319|PF02646|1e-31|35.2|219/296|RmuC| HM:PFM:NREP 2 HM:PFM:REP 99->385|PF02646|3.8e-90|34.6|286/305|RmuC| HM:PFM:REP 75->110|PF06825|0.00044|25.0|36/54|HSBP1| OP:NHOMO 365 OP:NHOMOORG 362 OP:PATTERN -------------------------------------------------------------1------ ------------------------------------------------1---------11------------------1---------111111-----1-11------1-------------------1111--1-------------------------------------------1-----------1------------------------------------------------------------------------------------111111111111111111111111111111111111111111111111--------------------------------11--11--1----11-1-------1111111111--11111111111111111---------111-11111111111111--1111111111111111111111111-1---11---1----------------------1---11111111--11----11-1-------1-1111----1121--11111111-11111----------1111---1--1--------1-11---1111-1--1-1-----------1-------11--1--11--111-1-1-2111111111111111-11-----1------1---11-1111111111-111111111111111111111111-1-1111111111111111-1111111--------------11-111111111111--1--------------------------111111111111111211--1-1--1-----1111111111111111111111111--------------------1--------1-11-----1---1---------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 219 STR:RPRED 53.4 SQ:SECSTR #####################################################################################################HHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH###HHHHGGGcTTcccEEEEEEccccTTcTTcHHHHHHHHHHccccccEEEEEETTEEEEEEEHHHHHHHHHHHGGGcccccEEEEEEEcTTcHHHHHHHHHHHHHHHHHHccEEEEcTTcccccHHHHHHHHHHHHHHHHHTcEEEEcHHHHHHHTccccHHHHHHHHHHHHHHH####################################################################################### DISOP:02AL 54-124, 360-362, 374-403, 407-410| PSIPRED cEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccEEEEEEccccccEEEEEcccccccEEEEccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccHHHHHHHHHcccHHHHHHHHccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEccc //