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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86195.2
DDBJ      :             hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  142/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:237 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->157 1aq6A PDBj 6e-07 29.5 %
:RPS:PDB   94->232 2cfsA PDBj 8e-12 15.9 %
:RPS:SCOP  21->232 1aq6A  c.108.1.1 * 2e-19 23.0 %
:HMM:SCOP  17->232 1vj5A1 c.108.1.2 * 9.5e-30 28.9 %
:HMM:PFM   21->190 PF00702 * Hydrolase 8.5e-14 23.3 163/192  
:BLT:SWISS 22->198 YAI5_SCHPO 3e-12 31.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86195.2 GT:GENE AAK86195.2 GT:PRODUCT hydrolase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(372000..372713) GB:FROM 372000 GB:TO 372713 GB:DIRECTION - GB:PRODUCT hydrolase GB:PROTEIN_ID AAK86195.2 GB:DB_XREF GI:159139608 LENGTH 237 SQ:AASEQ MDTKPKNLPDAADFAHVSEWVFDLDNTLYPHHVNLFSQIDRNMTAYVAELLKLDPEEARVLQKRYYHDHGTTLQGLMINYGISPDEFLERAHAIDYSALKPHPELGEAIKALPGRKFILTNGSVKHAQAAAGALGILDHFEDIFDIVAANYLPKPASATYEKFAALAKLDTKKAAMFEDLPRNLAAPKALGMKTVLLVPSNLEGVIMERWEIPDVTDEHIDYITDDLTGFLAKTIAR GT:EXON 1|1-237:0| BL:SWS:NREP 1 BL:SWS:REP 22->198|YAI5_SCHPO|3e-12|31.0|174/226| SEG 162->175|kfaalakldtkkaa| BL:PDB:NREP 1 BL:PDB:REP 21->157|1aq6A|6e-07|29.5|129/245| RP:PDB:NREP 1 RP:PDB:REP 94->232|2cfsA|8e-12|15.9|138/291| HM:PFM:NREP 1 HM:PFM:REP 21->190|PF00702|8.5e-14|23.3|163/192|Hydrolase| RP:SCP:NREP 1 RP:SCP:REP 21->232|1aq6A|2e-19|23.0|200/245|c.108.1.1| HM:SCP:REP 17->232|1vj5A1|9.5e-30|28.9|194/226|c.108.1.2|1/1|HAD-like| OP:NHOMO 212 OP:NHOMOORG 191 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------11---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----111111111111111111111111-11111111111-111111111111111111111111111-------------111-----------------------------1-1111111111111111111111111-11111111111--11111---------111-11111111-111---111----------------------1----------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111---------------------------------------------------------------------------------------- ----11---------111--1-11--1111-11-1------11111--111-111111-1--------------------1--1--------1-------11--------------------------------------------------------------------------1111-11-11467171------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 216 STR:RPRED 91.1 SQ:SECSTR ################ccEEEEcccTTTccHHHHHHTTccccHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTcccccEHHHEEEEEcccTTccHHHHHHHHHHHTTcEEEEcccccTTccEEEcHHHHHHHHHHHHTcccEEcEcTTcTHHHHHHTTcccccGGGEEEEEccTTTHHHHHHTTcEEEEETTccccHHHHHHHHHTTcGGGcccEEEccGGGGGG##### DISOP:02AL 1-6,8-8| PSIPRED cccccccccccHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHHHcccHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHccEEEEEEcccccccccHHHHHHHHHHccccHHHEEEEcccHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcc //