[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86206.2
DDBJ      :             ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  898/915 : Eukaryota  91/199 : Viruses  0/175   --->[See Alignment]
b.40.6c.37.1
:343 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   2->288 1g291 PDBj 2e-59 49.6 %
:RPS:PDB   2->215 3dmdC PDBj 2e-34 12.6 %
:RPS:SCOP  2->216 1b0uA  c.37.1.12 * 6e-30 27.6 %
:RPS:SCOP  188->339 1q12A1  b.40.6.3 * 1e-15 20.0 %
:HMM:SCOP  2->220 1odfA_ c.37.1.6 * 5.3e-56 43.8 %
:HMM:SCOP  217->341 1q12A1 b.40.6.3 * 1.3e-14 31.1 %
:RPS:PFM   7->143 PF00005 * ABC_tran 5e-11 34.1 %
:HMM:PFM   7->142 PF00005 * ABC_tran 3.5e-26 34.5 113/118  
:HMM:PFM   254->326 PF08402 * TOBE_2 3.3e-07 20.8 72/75  
:HMM:PFM   107->182 PF02463 * SMC_N 7.5e-05 27.0 74/220  
:BLT:SWISS 2->333 UGPC1_AGRT5 4e-67 47.4 %
:PROS 115->129|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86206.2 GT:GENE AAK86206.2 GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 384108..385139 GB:FROM 384108 GB:TO 385139 GB:DIRECTION + GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK86206.2 GB:DB_XREF GI:159139613 LENGTH 343 SQ:AASEQ MSGCGKSTLLRIIAGLESPDRGSVSIGGQDVTEIDPSDRNLAMVFQSYALYPHMSVRQNIATPLRMRRLPFAARLPLIGRFAAPAETLKQIDAAVEQAAETLQIAHLLDRKPAQLSGGQRQRVALARALVRSPAAFLMDEPLSNLDAKLRAHMREELAGLHRRLGATFIYVTHDQIEAMTMSDRIALMSEGRIEQLGTPDELYRKPATLTVARFIGTPSINLLPVEIDAQGRITAFGRDLGIEGAGRDAGPATLGLRAEDLRPGEEGFTVRVVRSETHGADRFVSCRLLSDETVSMTLRQGADEVLGADADGMMNLGFAPERAHLFAADGLRRKVTVRERVPA GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 2->333|UGPC1_AGRT5|4e-67|47.4|306/366| PROS 115->129|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 117->131|ggqrqrvalaralvr| BL:PDB:NREP 1 BL:PDB:REP 2->288|1g291|2e-59|49.6|270/372| RP:PDB:NREP 1 RP:PDB:REP 2->215|3dmdC|2e-34|12.6|182/318| RP:PFM:NREP 1 RP:PFM:REP 7->143|PF00005|5e-11|34.1|123/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 7->142|PF00005|3.5e-26|34.5|113/118|ABC_tran| HM:PFM:REP 254->326|PF08402|3.3e-07|20.8|72/75|TOBE_2| HM:PFM:REP 107->182|PF02463|7.5e-05|27.0|74/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 2->216|1b0uA|6e-30|27.6|199/258|c.37.1.12| RP:SCP:REP 188->339|1q12A1|1e-15|20.0|125/135|b.40.6.3| HM:SCP:REP 2->220|1odfA_|5.3e-56|43.8|194/0|c.37.1.6|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 217->341|1q12A1|1.3e-14|31.1|122/0|b.40.6.3|1/1|MOP-like| OP:NHOMO 20994 OP:NHOMOORG 1056 OP:PATTERN CCA4EFA3EFFEEDD7R7AFBDDEV9AKNBNC537788BBBA6HJBEICFgQM5EHDGE5CAC6F-53 GIJ9xCBFNNQCBAGGECC-CM55EsCCCCCBRQSRNknoBUDbMVQJIGF9STVBEH33OONIbSZpXnKIFEERGHGBMHM62666DD9918554--358584B6CB8-11111122222226BD79D76C9B9EDEOP665PJGDJOHHIINEFA45598FHFLQPNB3953211A3451BDDB9IF3GITWWZUZXgePZbaYaehaOOSWbXhJMTVSJTNPPNOP*qHGGHHHFGGGGGGGFGFFFBQHEHSTFBDBDMJ77USFEFFGFFFGGGGLIHIHOOHIIIGIIHIGGJJJJIJKKIKJIKMIJJIHKKKKDaPYXVVVWUWUIRKIXTTBFFCKJNHChBHB9upIIDEJNBKABDD5BFD7GIDD977577QG***EGQsXerVYaYbZXbWZa*-QUrPNoNc**F3*************m79Beq*uttyvdmEDEEEEEEPFI9DHHY33233333122211--2222221123132968886h**irhsuvskZebdYoo**ifggOgtr*ghog28ZZVbPZSTrc*o**HQO9GCGQHDDBBBCBEDGIMJJMlBOLWOGKSIIRALIIFFGKKAEGCFWZGS477A38779773444444443A64656TOWAMEI8E8gBDEEE9GFCCCCCCDHCFE5-38EBB------dd*rIfUSVVSTVSVTS-WSRTRSWVSUWVUQQRRQSs*uwwMJJSRRRRRRSRRRPRPRQoPQMPPOQC-Zbcbdedceddd2277675777777A7hVnHHHIKJBEGDEHBCNEFGGF9H8CERHYWVWeljxcgmccNpro6544454459LRQRRQRRQaeabZGFC9A9ACDC8787125G88766635333333I5A53523-33336543333224551118GA88IMJHG5LC ----53--422-35221----1-----------1------------------1--------------------------------------11--------------1-4-4638764-3127456152Fb6243551--423331312232-B2542D----A231-57F--423111711-23422F-122-B2761 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,334-344| PSIPRED cccccHHHHHHHHHccccccccEEEEccEEcccccHHHccEEEEEccccccccccHHHHHHHHHHHccccHHHHHHHccccccccccHHHHHHHHHHHHHHcccHHHHcccHHHccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHHccccHHHHHHcccccEEEEEEEEEcccEEEEcccccccccccccccEEEEEEEcHHcEEccccEEEEEEEEEEcccEEEEEEEEccccEEEEEEEcccccccccccccEEEEEEcHHHEEEEcccccEEEccccccccc //