[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86245.1
DDBJ      :             O-succinylhomoserine sulfhydrylase
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  754/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->392 1e5eB PDBj 4e-74 36.3 %
:RPS:PDB   8->388 3e6gA PDBj e-107 39.3 %
:RPS:SCOP  6->393 1cs1A  c.67.1.3 * 2e-77 32.4 %
:HMM:SCOP  15->395 1cs1A_ c.67.1.3 * 6.5e-122 41.2 %
:RPS:PFM   8->390 PF01053 * Cys_Met_Meta_PP e-104 49.3 %
:HMM:PFM   8->389 PF01053 * Cys_Met_Meta_PP 4.9e-133 44.6 381/386  
:BLT:SWISS 9->392 METZ_PSEAE 1e-85 41.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86245.1 GT:GENE AAK86245.1 GT:PRODUCT O-succinylhomoserine sulfhydrylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(428128..429312) GB:FROM 428128 GB:TO 429312 GB:DIRECTION - GB:PRODUCT O-succinylhomoserine sulfhydrylase GB:PROTEIN_ID AAK86245.1 GB:DB_XREF GI:15155351 LENGTH 394 SQ:AASEQ MSNKWRPATQLVHGGTLRSPYGETSEAIYLTQGFVYENSEAAEARFKGETDGFIYARYASPTNDMFEKRMCLLEGAEDARALASGMAAVTAAIMCQLRAGDHIVAARALFGSCRWVVETLAPKYGIECTLIDGRDLDNWEKAIQPNTKLFFLESPTNPTLEVVDIAGVAKLANQIGAKVVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVILSDKKWIEEELQDYFRHTGPAMSPFNAWTLLKGIETLPLRVKQQTENAAKIADFLADSGKVAKVIYPGRADHPQADIIARQMSGGSTLVAFELKGGKDAAFKLQNALEIVKISNNLGDAKSLITHPGTTTHKNLSDEARAELGISGGTLRLSCGIEDTDDLLEDLAKGLAAVSA GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 9->392|METZ_PSEAE|1e-85|41.8|383/403| BL:PDB:NREP 1 BL:PDB:REP 7->392|1e5eB|4e-74|36.3|386/393| RP:PDB:NREP 1 RP:PDB:REP 8->388|3e6gA|e-107|39.3|361/368| RP:PFM:NREP 1 RP:PFM:REP 8->390|PF01053|e-104|49.3|383/384|Cys_Met_Meta_PP| HM:PFM:NREP 1 HM:PFM:REP 8->389|PF01053|4.9e-133|44.6|381/386|Cys_Met_Meta_PP| GO:PFM:NREP 2 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF01053|IPR000277| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF01053|IPR000277| RP:SCP:NREP 1 RP:SCP:REP 6->393|1cs1A|2e-77|32.4|380/384|c.67.1.3| HM:SCP:REP 15->395|1cs1A_|6.5e-122|41.2|381/0|c.67.1.3|1/1|PLP-dependent transferases| OP:NHOMO 3049 OP:NHOMOORG 991 OP:PATTERN 22-1-11111111111-111111-3332233321--------1451-1-1221-111-1--2221--- 1741421233222144433-34223533333244443567133365423442446566--324-433334346554441-131-----33222211---11435442344---------------2323322431144444---43---2--1--11332321----2-1-33323333333334322--12435555555555555556633435553453511333333752333333333333323334421-11113-1-331112-1-253323-------222122221211111111111112111222333222-241573333333231227721113241-5333-22--1-242333321317-33335-----35967543C567544444443446167766846783-555666665866443543434544345222222224222335811-----------------------11112346424643463344754444333844441453465441143343555745665323111343222222222244221123-2-241----565354423445442112231122212112111111123121113332314434335455444444544355442--3321------52332332222222222-2222222232222222223333334462222222222222222422222222-32233333333322-311111111112214333334-22212223333332312231333344251656424221--------12223222222342233232333331111113122--11--------1----------------------------11--22222-32 ----113-631-5654554567565754444444646555345444455569A75544455545644425535445534555555543-57454483122323534-3644151121111111122111372-2131121111211111111111111211135241112133523235n4443465685644342225 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 394 STR:RPRED 100.0 SQ:SECSTR ccccTcHHHHHHHTTccccTTcccccccccccccccccHHHHHHHHHcHHHHHHHcccccHHHHHHHHHHHHHHTccEEEEEccHHHHHHHHHHTTccTTcEEEEEccccHHHHHHHHHHHHHHccEEEEEcTTcHHHHHHHccTTEEEEEEEcccTTTcccccHHHHHHHHHHTTcEEEEEcccccTTTccGGGGTccEEEEETTTTTTcccccccEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTcTTEEEEEcTTcTTcTTHHHHHHHccccccEEEEEETTHHHHHHHHHHHccccEEcccccccccEEEcTTTTTTcccccTTTTTccccccEEEEEcccccHHHHHHHHTTcHHcHcc DISOP:02AL 1-4| PSIPRED cccccccccEEEEccccccccccccccEEccEEEEcccHHHHHHHHcccccccEEEcccccHHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHccccccEEEEEcccccccccccHHHHHHHHHHcccEEEEEccccccccccHHHHcccEEEEEcccccccccccEEEEEEEccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHcccccEEEEEEEEccHHHHHHHHHcccEEEEEccccccccEEEcccccccccccHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHHHc //