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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86268.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1a.4.5
:270 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   33->74 1biaA PDBj 3e-04 11.9 %
:RPS:SCOP  28->74 1pdnC  a.4.1.5 * 5e-05 19.1 %
:RPS:SCOP  97->130 2d1hA1  a.4.5.50 * 8e-04 41.2 %
:HMM:SCOP  27->119 1pdnC_ a.4.1.5 * 8.4e-08 36.0 %
:RPS:PFM   98->237 PF07471 * Phage_Nu1 8e-09 30.7 %
:HMM:PFM   100->237 PF07471 * Phage_Nu1 1.4e-07 26.8 138/164  
:HMM:PFM   29->77 PF01527 * Transposase_8 7.6e-05 28.6 49/76  
:BLT:SWISS 95->234 TERS_ECOL6 4e-04 22.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86268.2 GT:GENE AAK86268.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 446189..447001 GB:FROM 446189 GB:TO 447001 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86268.2 GB:DB_XREF GI:159140664 LENGTH 270 SQ:AASEQ MGDCGISLCEENYRGVPPPFQWNRNQMAKSYPDELREQVVAFMDEGHTVREAAAKFNVSPSFAAKSHKKHAEAGESLPLLNETAPAEPEKPSLDIEITASELAELLKVSKRAVSDFVERGIVVKTERNRFDLRQSIQLYCEHLRGVAAGRGGDGADVLTAERARLAREQADQTAMKNAAMRGELISMTDVRNEWVSIGRRIRNAVLSVPSRCRQMLPHLTTYDVDLIGEEIRSALTELGDEDDDNGAGDIAASGMGQPVAAAETSAVGLD GT:EXON 1|1-270:0| BL:SWS:NREP 1 BL:SWS:REP 95->234|TERS_ECOL6|4e-04|22.9|140/182| SEG 144->157|rgvaagrggdgadv| RP:PDB:NREP 1 RP:PDB:REP 33->74|1biaA|3e-04|11.9|42/292| RP:PFM:NREP 1 RP:PFM:REP 98->237|PF07471|8e-09|30.7|140/156|Phage_Nu1| HM:PFM:NREP 2 HM:PFM:REP 100->237|PF07471|1.4e-07|26.8|138/164|Phage_Nu1| HM:PFM:REP 29->77|PF01527|7.6e-05|28.6|49/76|Transposase_8| RP:SCP:NREP 2 RP:SCP:REP 28->74|1pdnC|5e-05|19.1|47/123|a.4.1.5| RP:SCP:REP 97->130|2d1hA1|8e-04|41.2|34/102|a.4.5.50| HM:SCP:REP 27->119|1pdnC_|8.4e-08|36.0|86/0|a.4.1.5|1/1|Homeodomain-like| OP:NHOMO 6 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------2--------------1-------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 42 STR:RPRED 15.6 SQ:SECSTR ################################cHHHHHHHHHHTTcccHHHHHHHHTccHHHHHHHHHHHHHTT#################################################################################################################################################################################################### DISOP:02AL 1-1,64-74,86-88,143-157,270-271| PSIPRED ccccHHHHHHHccccccccccccHHHHHHHcHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccHHHcccccccHHHHccccccc //