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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86284.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  145/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
b.118.1
:185 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->183 1w7dA PDBj 2e-25 48.1 %
:RPS:SCOP  51->183 1o70A1  b.118.1.1 * 3e-29 27.8 %
:HMM:SCOP  38->183 1o70A2 b.118.1.1 * 1.6e-37 43.4 %
:RPS:PFM   51->183 PF02469 * Fasciclin 6e-21 48.8 %
:HMM:PFM   49->183 PF02469 * Fasciclin 2e-35 46.3 121/131  
:BLT:SWISS 29->185 Y1483_SYNY3 4e-30 52.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86284.2 GT:GENE AAK86284.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 461200..461757 GB:FROM 461200 GB:TO 461757 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86284.2 GB:DB_XREF GI:159139640 LENGTH 185 SQ:AASEQ MIKSAIRTLALATIVSAISASAFAANPKVGGAAMYENKNIVENAMNSKDHTTLVAAVKAAGLVETLQGKGPFTVFAPTNEAFAALPKGTVENLLKPENKAQLTKVLTCHVVEADAMSKTIEKMIKDDKGTHDVKTVGGCILKAKESMDKITLTDEMGGVAHVTIADVKQSNGVIHVIDKVLLPKM GT:EXON 1|1-185:0| BL:SWS:NREP 1 BL:SWS:REP 29->185|Y1483_SYNY3|4e-30|52.8|144/180| SEG 9->25|lalativsaisasafaa| BL:PDB:NREP 1 BL:PDB:REP 36->183|1w7dA|2e-25|48.1|135/137| RP:PFM:NREP 1 RP:PFM:REP 51->183|PF02469|6e-21|48.8|123/129|Fasciclin| HM:PFM:NREP 1 HM:PFM:REP 49->183|PF02469|2e-35|46.3|121/131|Fasciclin| RP:SCP:NREP 1 RP:SCP:REP 51->183|1o70A1|3e-29|27.8|126/140|b.118.1.1| HM:SCP:REP 38->183|1o70A2|1.6e-37|43.4|145/157|b.118.1.1|1/1|FAS1 domain| OP:NHOMO 429 OP:NHOMOORG 214 OP:PATTERN -------------------------------------------1--2--1212--------------- 1-2-1--1---------22-22----22222--111-1-1------------121-------1-1---14-----------------------------2-1-34-1231--------------1----------------111--22422214322------22146642------------111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1-11------12322---11111----------1-11-11-1--2--111121111111---4122-111132---------1-------------------------------------32-2-1-------------------------1---1----11--1111111----1-------------------------------------1---1-------------------------------------------1---1-------------------------------------------------------------------------------------------------------1----------------------------1----------------------112---------1----------------------1-----1-1--1111111111--------11---------------------------------------------------1- ------1-----------1-------------------------------------1-----------------------------------------------22--1-G3611382222221651427Q2-725222151222121213213-3221-----5A-------2-----1-1--1----1--41----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 80.0 SQ:SECSTR ###################################cccTTGGGGGcccccTTTTHHHHHTTTHHHHTccccEEEEcccHHHHTTcTTTHHHHTTcHHHHHHHHHHHHHHEEEccccTTTccEEEEccccEEEEcTTccEEEEEcTTccEEETTEEETTEEEcccccccccccEEEcccccccc## DISOP:02AL 1-3,30-34,130-130| PSIPRED cccccHHHHHHHHHHHHccHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHHcccHHHHHccccEEEEEccHHHHHHccHHHHHHHcccccHHHHHHHHHHHEEccEEEHHHHHHHHcccccccEEEcccccEEEEEEEccEEEEEcccccEEEEEEccccccccEEEEEccEEcccc //