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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86297.2
DDBJ      :             two component response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  645/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:216 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->204 1a04A PDBj 1e-13 25.5 %
:RPS:PDB   6->203 3c3wB PDBj 2e-21 25.9 %
:RPS:SCOP  6->123 1ny5A1  c.23.1.1 * 3e-11 16.5 %
:RPS:SCOP  148->204 1a04A1  a.4.6.2 * 2e-13 40.4 %
:HMM:SCOP  1->135 1k66A_ c.23.1.1 * 4.7e-25 28.9 %
:HMM:SCOP  130->211 1p4wA_ a.4.6.2 * 1.7e-16 37.8 %
:RPS:PFM   6->119 PF00072 * Response_reg 8e-07 28.8 %
:RPS:PFM   151->203 PF00196 * GerE 7e-11 54.7 %
:HMM:PFM   6->118 PF00072 * Response_reg 2.4e-24 33.3 111/112  
:HMM:PFM   151->204 PF00196 * GerE 2.6e-21 44.4 54/58  
:BLT:SWISS 6->213 AGMR_PSEAE 7e-34 47.5 %
:PROS 166->193|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86297.2 GT:GENE AAK86297.2 GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(473010..473660) GB:FROM 473010 GB:TO 473660 GB:DIRECTION - GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK86297.2 GB:DB_XREF GI:159139648 LENGTH 216 SQ:AASEQ MSELVIIIADDHPLFRGALKQAVAGLDGQQTIIEAGDFEAARHAATTRNDADLMLLDLAMPGVSGFSGLMALRAEFSSLPIVIVSATDDATTVRRSIELGASGFISKSSGIDDIRDGIRAVLEGDVWIPSGHQGEKEQDPDVADLIGRLRTLTPQQSRVLGMLAEGLLNKQIAYELNVSEATIKAHVSAILLKLKVDSRTQAVIQLAKINTSAMVA GT:EXON 1|1-216:0| BL:SWS:NREP 1 BL:SWS:REP 6->213|AGMR_PSEAE|7e-34|47.5|200/221| PROS 166->193|PS00622|HTH_LUXR_1|PDOC00542| SEG 50->60|dadlmlldlam| BL:PDB:NREP 1 BL:PDB:REP 6->204|1a04A|1e-13|25.5|192/205| RP:PDB:NREP 1 RP:PDB:REP 6->203|3c3wB|2e-21|25.9|197/210| RP:PFM:NREP 2 RP:PFM:REP 6->119|PF00072|8e-07|28.8|111/111|Response_reg| RP:PFM:REP 151->203|PF00196|7e-11|54.7|53/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 6->118|PF00072|2.4e-24|33.3|111/112|Response_reg| HM:PFM:REP 151->204|PF00196|2.6e-21|44.4|54/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 6->123|1ny5A1|3e-11|16.5|115/137|c.23.1.1| RP:SCP:REP 148->204|1a04A1|2e-13|40.4|57/67|a.4.6.2| HM:SCP:REP 1->135|1k66A_|4.7e-25|28.9|135/149|c.23.1.1|1/1|CheY-like| HM:SCP:REP 130->211|1p4wA_|1.7e-16|37.8|82/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 2452 OP:NHOMOORG 648 OP:PATTERN -------------------------------------------------------------------- 9BB3O4442223--32322-24--3522222265558CAC456J9A641443553231--35D4KBDIMH42111223-33-8-----------11---1-212153C11-------------------1------8888B336D5512422211------11-3-86471------------57511--2355444444542544445758847464142421222222267333333333333333333421---22-1---1111221---1-11112222123221222222222211111111111113122222221151421111211-1-11------1-1--A111-42112124-11111---4-13--1-----13G454336446655455544445-77488765476-65548688B789431-14126556335--------111--663-------------------------------331-3422353332414442229944441423587AF-16646643233668-35-3414211111111--1737213---12-12----2-311312211313342------------------------1--43-422645214434514444435335346---2313------73333636775655566-6666656666656556553424453226455666566546456666555651-644444344444--1212111-----292111111111111-11211111111-11288984A89777863866---------12343122222323498667654451111--1-111111--------2-------------------------------------1E- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--2-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 98.1 SQ:SECSTR cccccEEEEcccHHHHHHHHHHHHTcTTEEEEEEEccHHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHEEHHTHTcc#### DISOP:02AL 1-1,134-151,213-217| PSIPRED ccccEEEEEccHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccc //