[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86300.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.111.1
:165 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  39->159 1rc9A1  d.111.1.1 * 4e-05 15.8 %
:HMM:SCOP  37->164 1smbA_ d.111.1.1 * 9.3e-09 26.3 %
:HMM:PFM   48->160 PF00188 * CAP 4.1e-13 24.8 113/124  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86300.1 GT:GENE AAK86300.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(475394..475891) GB:FROM 475394 GB:TO 475891 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86300.1 GB:DB_XREF GI:15155414 LENGTH 165 SQ:AASEQ MTDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLAPLAINGAASGAAAYQAGRMVKAQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVERVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWAMVLCA GT:EXON 1|1-165:0| SEG 60->77|aplaingaasgaaayqag| HM:PFM:NREP 1 HM:PFM:REP 48->160|PF00188|4.1e-13|24.8|113/124|CAP| RP:SCP:NREP 1 RP:SCP:REP 39->159|1rc9A1|4e-05|15.8|114/164|d.111.1.1| HM:SCP:REP 37->164|1smbA_|9.3e-09|26.3|114/149|d.111.1.1|1/1|PR-1-like| OP:NHOMO 26 OP:NHOMOORG 25 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111-------------11-111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------112- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-7, 29-40| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccccHHHHHHcccccHHHHHHHHcccHHHHHHHcccccEEEEEEEEcccccccEEEEEEEEc //