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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86309.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  60/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.26.2
:145 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->145 1mjhB PDBj 2e-10 29.3 %
:RPS:PDB   1->145 2dumC PDBj 5e-21 22.0 %
:RPS:SCOP  1->145 1mjhA  c.26.2.4 * 2e-26 29.5 %
:HMM:SCOP  1->144 1mjhA_ c.26.2.4 * 3.4e-32 37.8 %
:RPS:PFM   88->144 PF00582 * Usp 8e-07 47.4 %
:HMM:PFM   1->144 PF00582 * Usp 4.2e-35 34.3 140/140  
:BLT:SWISS 92->145 Y577_METJA 3e-09 48.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86309.2 GT:GENE AAK86309.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(483264..483701) GB:FROM 483264 GB:TO 483701 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86309.2 GB:DB_XREF GI:159139658 LENGTH 145 SQ:AASEQ MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEFHRCEEAEHLLRDTQAHAAAMGLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSFIEMLLGSVTAKVLKNSKIPVLVYRQ GT:EXON 1|1-145:0| BL:SWS:NREP 1 BL:SWS:REP 92->145|Y577_METJA|3e-09|48.1|54/162| SEG 44->67|viasdvediaaiaeeefhrceeae| BL:PDB:NREP 1 BL:PDB:REP 1->145|1mjhB|2e-10|29.3|140/144| RP:PDB:NREP 1 RP:PDB:REP 1->145|2dumC|5e-21|22.0|141/146| RP:PFM:NREP 1 RP:PFM:REP 88->144|PF00582|8e-07|47.4|57/139|Usp| HM:PFM:NREP 1 HM:PFM:REP 1->144|PF00582|4.2e-35|34.3|140/140|Usp| GO:PFM:NREP 1 GO:PFM GO:0006950|"GO:response to stress"|PF00582|IPR006016| RP:SCP:NREP 1 RP:SCP:REP 1->145|1mjhA|2e-26|29.5|139/143|c.26.2.4| HM:SCP:REP 1->144|1mjhA_|3.4e-32|37.8|143/0|c.26.2.4|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 91 OP:NHOMOORG 68 OP:PATTERN ------------------------1--2------1--------------1-11--------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111----------------1---1-----1----11----------1------1--1-------------------------------------------------------11-11--1-1-----112-------1114373-1112121-11221212-1----------------111------1-------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-3----------------------------------------------11----------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 145 STR:RPRED 100.0 SQ:SECSTR cccEEEEEccccHHHHHHHHHHHHHccccccEEEEEEEEEGGGTTccccccGGGGGGTHHHHHHHHHHHHHHHHHHHHHTTccEEEEEEEEEcHHHHHHHHHHHHTccEEEEEccccccccTTcccHHHHHHHHHccccEEEEcc PSIPRED cccEEEEEccccHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHccccEEEEEccccccHHHHcccHHHHHHHHHccccEEEEEc //