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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86436.1
DDBJ      :             two component response regulator
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  856/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:225 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->221 2oqrA PDBj 2e-30 33.5 %
:RPS:PDB   1->220 3c3wB PDBj 8e-25 17.4 %
:RPS:SCOP  1->118 1a0oA  c.23.1.1 * 2e-26 33.1 %
:RPS:SCOP  122->224 1ys6A1  a.4.6.1 * 1e-20 25.2 %
:HMM:SCOP  1->188 1s8nA_ c.23.1.1 * 1.3e-35 32.3 %
:RPS:PFM   3->112 PF00072 * Response_reg 6e-18 40.9 %
:RPS:PFM   165->221 PF00486 * Trans_reg_C 3e-06 35.1 %
:HMM:PFM   3->113 PF00072 * Response_reg 7.2e-26 33.3 111/112  
:HMM:PFM   146->221 PF00486 * Trans_reg_C 4.3e-25 39.5 76/77  
:BLT:SWISS 1->224 COPR_PSESM 4e-56 46.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86436.1 GT:GENE AAK86436.1 GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(618020..618697) GB:FROM 618020 GB:TO 618697 GB:DIRECTION - GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK86436.1 GB:DB_XREF GI:15155576 LENGTH 225 SQ:AASEQ MKILLVEDDNTTGNYVTKGLASAGHIVDWVKDGREALAAGLDGGYDVAIVDRMIPGLDGLNLVKSLRAASIRIPILFLTAMSGVDDRVEGLEAGGDDYLVKPFAFSELTARINALVRRPPITTEKTRLRVGDLEMNLVTRTTSRGGQRIDLLPREFSLLELLMRNEGRILTKTMFLEKIWNFNFDPQSSVVETHISRLRAKIDKPFDQPLLHTVKNTGYTLHARR GT:EXON 1|1-225:0| BL:SWS:NREP 1 BL:SWS:REP 1->224|COPR_PSESM|4e-56|46.4|224/227| SEG 151->162|llprefsllell| BL:PDB:NREP 1 BL:PDB:REP 3->221|2oqrA|2e-30|33.5|218/226| RP:PDB:NREP 1 RP:PDB:REP 1->220|3c3wB|8e-25|17.4|207/210| RP:PFM:NREP 2 RP:PFM:REP 3->112|PF00072|6e-18|40.9|110/111|Response_reg| RP:PFM:REP 165->221|PF00486|3e-06|35.1|57/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 3->113|PF00072|7.2e-26|33.3|111/112|Response_reg| HM:PFM:REP 146->221|PF00486|4.3e-25|39.5|76/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 1->118|1a0oA|2e-26|33.1|118/128|c.23.1.1| RP:SCP:REP 122->224|1ys6A1|1e-20|25.2|103/106|a.4.6.1| HM:SCP:REP 1->188|1s8nA_|1.3e-35|32.3|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 11554 OP:NHOMOORG 922 OP:PATTERN -----------------------------1-------------22-26-5111--------------- 8GN6O466778655AAA99-9E44AA999998GCDD9FHEBBCEA7676987BCD45711JHN5R7HQLO8333355458IA715476DDRN-B22---34H489R4MCG----------1111232354345353SQQVRG8FT6gNYSONAGFBC677AA8LHDCdfkI585555675554CE69A341A6GUUVUVSTVGVSWWURHJDBBDUVc8ADV7FEA99A9AgX78888887888888868886B675CC645466666CB655675686DED866889988888898888555556666765587766476775SKLdPPPTTTTSRJEaVV8DFBPKE8BBGNB4dXIA9334767686228JCBHHHG56656HCQRTGBFJRHMQAA9AAAAA99D-HIPGJQMPBMC1PMMLLLLRRNHGHMBCAFBIGBFEADAAAAAAAAAACBAARGD2222222222223333333333323222239DG66CGFCHSVYWaSNKKKFSSTWMKMMDMYUSQNQb12JPNTHJFDYJIMO6KQKCBBCL91211111885EUiBUQGB6T97fLGFJ1UOUQMTQCJHGKJXaEMH7786566666121112111CH8CH66NIAIILOBJFFOJOPMELKPNMLMMLLNOP--36769------GGEFDFBIIIJIIJKHI-IKJHIIIHJJIIIIIIIIGJHJDG99BGFGGGGGGFGGFGFGGHFEDGGHI91DEEGGFFFFFFF--3D333334545BEcCO444333244443114CBABD8B8A9IFVRYVQYWZLTWWVJPOT3212132127FHHNGGGGGKMOPQNQHEJEFEEG5545--T2AA5555222-2---2-2-------------------------48433667556N3 ----1---------5--11--121--1-------------------1---------1-11---211-112--212-----12222211-12--13-11--121455----------------------------------------------------2----2-1-------3-1121---1--4--B1---1C-31- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 225 STR:RPRED 100.0 SQ:SECSTR EEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHEEEEHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccHHHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTccEcccc DISOP:02AL 119-126| PSIPRED cEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHcccccccEEEEEEccEEEEEccc //