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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86468.1
DDBJ      :             hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  45/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.108.1
:248 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   6->243 1s2oA PDBj 5e-18 27.0 %
:RPS:PDB   152->248 2b30A PDBj 8e-09 20.9 %
:RPS:SCOP  1->245 1s2oA1  c.108.1.10 * 8e-17 25.1 %
:HMM:SCOP  1->243 1nf2A_ c.108.1.10 * 1.7e-28 28.6 %
:RPS:PFM   3->214 PF05116 * S6PP 3e-19 31.1 %
:HMM:PFM   5->245 PF05116 * S6PP 1.1e-76 37.2 239/247  
:BLT:SWISS 6->247 SPP2_MAIZE 6e-22 33.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86468.1 GT:GENE AAK86468.1 GT:PRODUCT hydrolase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(654495..655241) GB:FROM 654495 GB:TO 655241 GB:DIRECTION - GB:PRODUCT hydrolase GB:PROTEIN_ID AAK86468.1 GB:DB_XREF GI:15155614 LENGTH 248 SQ:AASEQ MKPLRLLSTDLDGTVVGDNDATRRFRDFWHALPDDLRPVLVFNSGRLIDDQLALLEEVPLPQPDYIIGGVGTMLHAKKRSELETAYTQSLGTGFDPRKIADVMNRIAGVTMQEERYQHGLKSSWFLHDADAAALGEIEAALLAADIDARIVYSSDRDLDILPKAADKGAALAWLCGQLRIGLDESVVSGDTGNDRAMFELKTIRGVIVGNALPELVSLAHQDNRFFHSTAKEADGVIEGLRHWGLNPR GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 6->247|SPP2_MAIZE|6e-22|33.1|239/437| SEG 128->148|dadaaalgeieaallaadida| BL:PDB:NREP 1 BL:PDB:REP 6->243|1s2oA|5e-18|27.0|233/244| RP:PDB:NREP 1 RP:PDB:REP 152->248|2b30A|8e-09|20.9|91/284| RP:PFM:NREP 1 RP:PFM:REP 3->214|PF05116|3e-19|31.1|209/215|S6PP| HM:PFM:NREP 1 HM:PFM:REP 5->245|PF05116|1.1e-76|37.2|239/247|S6PP| RP:SCP:NREP 1 RP:SCP:REP 1->245|1s2oA1|8e-17|25.1|239/244|c.108.1.10| HM:SCP:REP 1->243|1nf2A_|1.7e-28|28.6|224/267|c.108.1.10|1/1|HAD-like| OP:NHOMO 71 OP:NHOMOORG 53 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------1--------------------------------------------1111-----11------1211112----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------2----------------------------------11-11-1------11--------------------------------------------------------------------------------------------------------------------------------1-1---------1111----21--1--------------------------------------------------11---------------------------------1--1----------------------------------------------------------------------------------------------------------------------------------------------1-----------------11----------1-----1-11---------1------------------------------------------------------1- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------114333-52------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 246 STR:RPRED 99.2 SQ:SECSTR ##ccEEEEEEccTTTccTTccccHHHHHHHHHTTTcEEEEEEEccccHHHHHHHHcTTHHHHccEEEcGGGTEEEETTEEEEEccHHHHHcHHHHHHHHHHHHHHHHHccccccccccEEEETTEHHHHcHHHHHHHHHHHHTTTccEEEEEcTTccEEEEETTccHHHHHHHHHHHTTccGGGEEEEEccGGGHHHHHcccEEEEEcTTccHHHHHHccccEEcEEccccTTTTHHHHHHHHHHTTc PSIPRED cccEEEEEEEcccccccccccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccccEEEEcccEEEEccccccccHHHHHHHHccccHHHHHHHHHHccccEEccccccccEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEcccEEEEEcccccHHHHHHHHHHHccccHHHEEEEcccccHHHHHHHccccEEEEccccHHHHHHccccccEEEEcccccHHHHHHHHHHccccc //