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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86476.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.4.1
:219 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   116->219 3dzmB PDBj 1e-04 9.7 %
:RPS:SCOP  116->189 1p4tA  f.4.1.1 * 4e-07 27.9 %
:HMM:SCOP  20->219 1g90A_ f.4.1.1 * 1.7e-21 28.2 %
:RPS:PFM   118->189 PF01617 * Surface_Ag_2 2e-04 44.4 %
:HMM:PFM   116->183 PF01617 * Surface_Ag_2 3.7e-10 44.1 59/282  
:BLT:SWISS 1->192 MIPA_SHIFL 2e-04 30.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86476.1 GT:GENE AAK86476.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(664389..665048) GB:FROM 664389 GB:TO 665048 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86476.1 GB:DB_XREF GI:15155624 LENGTH 219 SQ:AASEQ MSRHTLLVCALLFSGVSFSAATAGEFEISGYGGWQSAPHSDVTVSDGPDFRAGWEGKSFSNPPYWGVRGTYWFDEGQLRNFGISLDFTHDKVYADDETLARSGWSHFEFTDGLNLLTLNALYRFPLESLPITPYVGAGVGINVPHVEVYRPSGKTFEYQFGGATLQAQAGLSYRITDSWSTFVEYKGTYSFIDVDIDNGGSLKTDVITNAVNFGVAYKF GT:EXON 1|1-219:0| BL:SWS:NREP 1 BL:SWS:REP 1->192|MIPA_SHIFL|2e-04|30.9|178/248| RP:PDB:NREP 1 RP:PDB:REP 116->219|3dzmB|1e-04|9.7|103/204| RP:PFM:NREP 1 RP:PFM:REP 118->189|PF01617|2e-04|44.4|63/240|Surface_Ag_2| HM:PFM:NREP 1 HM:PFM:REP 116->183|PF01617|3.7e-10|44.1|59/282|Surface_Ag_2| RP:SCP:NREP 1 RP:SCP:REP 116->189|1p4tA|4e-07|27.9|68/156|f.4.1.1| HM:SCP:REP 20->219|1g90A_|1.7e-21|28.2|170/0|f.4.1.1|1/1|OMPA-like| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-11-111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 47.5 SQ:SECSTR ###################################################################################################################EEEEEEEEEEEccccEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEcEccccEEEEEEcTTccEEEEEEcTTcTTH DISOP:02AL 1-4| PSIPRED cccHHHHHHHHHHHHHHEEEccccEEEEEEEcccccccccccEEcccccccccccccccccccEEccEEEEEEEccccccccEEcccEEEEEEccHHHHHcccccccccccccEEEEEEEEEEccccccccccEEEEEEcccccEEEEEcccccccccccccEEEEEEEcccEEEcccEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEEEEEEc //