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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86531.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  278/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.28d.350.1
:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   33->223 3cl4A PDBj 6e-09 8.0 %
:RPS:PDB   247->368 2dqxA PDBj 3e-18 13.8 %
:RPS:SCOP  81->192 2h7aA1  d.350.1.1 * 3e-08 9.1 %
:HMM:SCOP  77->267 1tv8A_ c.1.28.3 * 4.8e-09 25.9 %
:RPS:PFM   86->261 PF04055 * Radical_SAM 2e-06 29.6 %
:HMM:PFM   82->260 PF04055 * Radical_SAM 4e-22 23.5 162/166  
:BLT:SWISS 76->300 Y2609_MYCBO 7e-30 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86531.2 GT:GENE AAK86531.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(720729..721838) GB:FROM 720729 GB:TO 721838 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86531.2 GB:DB_XREF GI:159139749 LENGTH 369 SQ:AASEQ MPDIANALADASGLRIEIDRRRGRGAGLNPDGRFEALQREVFDDGWQTLEDMPEFRTEVQVEKPRSIITHNESPDIPFDRSINPYRGCEHGCIYCFARPSHSYMGLSAGLDFESKLFAKPDAAKLLERELAKPGYKPRVIAIGTNTDPYQPIEREWRIMRQILEVLAKADHPVAIVTKSALIRRDIDILAPMAKKGLAKVGISVTTLDRKLARNMEPRAATPEKRLEAVKALTEAGVPVAVMMAPVIPALNDHEIERILEAGKAAGATEASYVLLRLPLEVSPLFRDWLLRNYPDRYRHVMSLVRSMRDGKDYDAEFGKRMKGAGPYAWQIGRRFEMATKRLGLIRRGIHLRDDLFVPPGGAGVQLSLL GT:EXON 1|1-369:0| BL:SWS:NREP 1 BL:SWS:REP 76->300|Y2609_MYCBO|7e-30|30.7|225/340| SEG 237->246|vpvavmmapv| SEG 341->352|rlglirrgihlr| RP:PDB:NREP 2 RP:PDB:REP 33->223|3cl4A|6e-09|8.0|174/358| RP:PDB:REP 247->368|2dqxA|3e-18|13.8|109/491| RP:PFM:NREP 1 RP:PFM:REP 86->261|PF04055|2e-06|29.6|159/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 82->260|PF04055|4e-22|23.5|162/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 81->192|2h7aA1|3e-08|9.1|99/109|d.350.1.1| HM:SCP:REP 77->267|1tv8A_|4.8e-09|25.9|174/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 358 OP:NHOMOORG 321 OP:PATTERN 222131111111121221322223---1----11--1--------1--1-111-231222211-4--- 111-1---------11111-11--111111111111111111-1-11--1-1111-11---1----1111----------1-1--------1-------1---11111-1--------------------------11111---1---1---------------1-----1-----------------1111------------------1----------1----------1----------------------------------------------------1----------------------------------------111111111-2-12------1-----11-111--1----2---3---1--1111-----111111111111111111111111-11111111111-11111111111111111-111111-11--------111-1-1-------------------------------1111-111111111111111111111111111111121--111111111-1-1---1-1-1-----------1-11-------1-1-------------111-111-----------------------------112---------------------------------1---------------------------------------------------------------------------------------------1-111----11111--------------------------111211111111111111------------------------1111111111-------1----11--------2----------------------------1---11111121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 94.3 SQ:SECSTR ######ETTEEccccEEEcccTTccccccEEEEETcTTcHHHHHHcHHHHcccHHHHHHHHHHHHHHEEEEEcTTcccEEEEEEEcccccccTTccTcGGGccTTccEEEc######ccHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGGHHHHHHHHHHHHHHHHHHTTTccEEEEEccccccccHHHHHHHHTccEEEEEcccccHHHHHHHHccGcccHHHHHHHHHHHHHTcEEEEEEEcTcccccHHHHHHHHHHHcTTcccTTccccccccEEEEccccHHHHcTcHHHHHHHHHHHHHHTTTccccccGGGGTcccccccccTGGcccccHH########HHGGGGcccccccccccccc# DISOP:02AL 1-7,363-364| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEEcccccccccEEEccccccccccEEEEEcccccccccccccccccEEEEcccHHHHHHHHHHcccccccEEEEEcccccccccHHHccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccHHHcccccccccccccc //