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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86534.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  757/915 : Eukaryota  167/199 : Viruses  0/175   --->[See Alignment]
d.115.1
:325 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->314 2eqaA PDBj 4e-38 39.9 %
:RPS:PDB   1->100 3c9dA PDBj 1e-15 13.0 %
:RPS:PDB   112->224 2e6gH PDBj 1e-17 13.7 %
:RPS:SCOP  4->197 1k7jA  d.115.1.1 * 5e-45 21.5 %
:HMM:SCOP  1->212 1jcuA_ d.115.1.1 * 2.8e-56 41.5 %
:RPS:PFM   25->183 PF01300 * Sua5_yciO_yrdC 1e-29 53.2 %
:RPS:PFM   218->324 PF03481 * SUA5 4e-08 43.9 %
:HMM:PFM   22->197 PF01300 * Sua5_yciO_yrdC 4.8e-56 47.7 174/179  
:HMM:PFM   201->324 PF03481 * SUA5 2.5e-26 35.8 123/152  
:BLT:SWISS 18->324 YWLC_BACSU 1e-52 44.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86534.2 GT:GENE AAK86534.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(724192..725169) GB:FROM 724192 GB:TO 725169 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86534.2 GB:DB_XREF GI:159139751 LENGTH 325 SQ:AASEQ MARHINIETERETALQASVAELADGRPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLICHMADIAMAERYAVFDPISRKLAEAFWPGPLTLVLPLKPESDIHSLATAGLDTVGIRVPQGFASDLIRRFGKPLAAPSANSSGKISPTSAAHVEADLGQKINLVLDGGAAAVGVESTIVKVEQDGRVRLLRPGGIVTEEIERLAGVRLERPKKASAAIEAPGMLASHYAPGATVRLGATSVLPDEALIRFGGIAISGEETARTILDLSPSGDLAEAAANLFDYLKAADASGADTIAITAIPTHGLGEAINDRLSRAAAPRG GT:EXON 1|1-325:0| BL:SWS:NREP 1 BL:SWS:REP 18->324|YWLC_BACSU|1e-52|44.7|304/346| BL:PDB:NREP 1 BL:PDB:REP 22->314|2eqaA|4e-38|39.9|273/327| RP:PDB:NREP 2 RP:PDB:REP 1->100|3c9dA|1e-15|13.0|100/208| RP:PDB:REP 112->224|2e6gH|1e-17|13.7|102/229| RP:PFM:NREP 2 RP:PFM:REP 25->183|PF01300|1e-29|53.2|158/178|Sua5_yciO_yrdC| RP:PFM:REP 218->324|PF03481|4e-08|43.9|107/146|SUA5| HM:PFM:NREP 2 HM:PFM:REP 22->197|PF01300|4.8e-56|47.7|174/179|Sua5_yciO_yrdC| HM:PFM:REP 201->324|PF03481|2.5e-26|35.8|123/152|SUA5| RP:SCP:NREP 1 RP:SCP:REP 4->197|1k7jA|5e-45|21.5|191/206|d.115.1.1| HM:SCP:REP 1->212|1jcuA_|2.8e-56|41.5|207/208|d.115.1.1|1/1|YrdC/RibB| OP:NHOMO 1087 OP:NHOMOORG 990 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111--1 2221111111111111111-1111111111111111121111111121111111111111221111111121111111111111-11111-112--1---12211112121111111111----111111111111111111111111-----21111-1-111--111111-11111-1-11-1-111111111111111111111111111111111111111111111111222222122222211111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111211111111111111111111111111111111111-11111111111111111121111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111121111111112111-122211111111111111111-3--------111111122221111-1--1-11111111122222222-------------------------1111-----1-112111111111121111211---11111-----111111-1111111111-11111111111111111111111111-11111111111111111111111111111111111111-11-11111111112------1-----------1111111---1-----1---211111-------------111122222111221111111111------2111222213111111--111-1---------------------1111111111111 1111111-211111121111111111111111111111111-11-111111111111-1111111111-1111111111111111111-121111111111211111121632322-11-1--121---------1-1--1--1--11-----1121131221221111111112111-11111111111112121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 313 STR:RPRED 96.3 SQ:SECSTR EEEcccTTTcccEEEEEEEEEEcccEEEEccccccccGGGTTTcTTTcccTTcHHHHHHHHHHHTcHHcccTTcccTTHHHHHHHHHHTHHHHHHHHHHHHHEcTTccHHHcccTTcHHHHHccHHHHHHTTccEEEEcEEcccccccccEEEEEcccccTTcccEEEEEccHHHHHHHHHHHHHHHccccGcEEEEEEHHHEEccccGGGGTTcHHHHHHHHHTcccccccccccEEEEEccGGHHHHHHTTTccEEGTGGGTTcEEEEEEcTTcHHHHHHHHHHHHHHHHHcccc#EEEEcccccTTHHHHH########### DISOP:02AL 1-1,321-326| PSIPRED cccccccccccHHHHHHHHHHHHcccEEEEEcccEEEEEEccccHHHHHHHHHHHcccccccEEEEEccHHHHHHHHcccHHHHHHHHHHccccEEEEEEccccccccHHHcccccEEEEEcccHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHcccccEEEEcccccccccccEEEEccccEEEEEEcccccHHHHHHHcccEEEcccccccccccccccccccccccEEEEEEccccHHHHHcccccEEEcccccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHcccc //