[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86540.2
DDBJ      :             divalent cation transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  56/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.328.1f.17.3
:331 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   10->264 3ck6E PDBj 8e-17 11.5 %
:RPS:SCOP  7->172 2bbhA1  d.328.1.1 * 2e-11 10.1 %
:RPS:SCOP  266->302 2bbjA2  f.17.3.1 * 4e-10 24.3 %
:HMM:SCOP  8->264 2iubA1 d.328.1.1 * 1.2e-35 25.3 %
:HMM:SCOP  266->329 2iubA2 f.17.3.1 * 7.9e-13 26.6 %
:RPS:PFM   63->299 PF01544 * CorA 7e-10 21.1 %
:HMM:PFM   40->327 PF01544 * CorA 2.1e-63 26.7 288/292  
:BLT:SWISS 32->331 ZNTB_ERWCT 1e-09 21.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86540.2 GT:GENE AAK86540.2 GT:PRODUCT divalent cation transporter GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(729951..730946) GB:FROM 729951 GB:TO 730946 GB:DIRECTION - GB:PRODUCT divalent cation transporter GB:PROTEIN_ID AAK86540.2 GB:DB_XREF GI:159139756 LENGTH 331 SQ:AASEQ MDLITPTIPGLVWAYHFHPGTAPCRRLAPDAGFEDMAGYEGFYWLHLNLADQRVAGFLETIVGLDPAARASLTTHETHPSIVVDEKSLYGTLVDFQREFDKETRDFGWLHFAVGDRFIITTRLQPLHSVDRLKAAVDKNSNRYLTPSHVFEGLVAEFQRSLINLVMETTEELNAIEDMVYDSENRDERRRLAPLRRTVVRLHRHLRTVLTLMRRASAADDDEMPDGFEDVASRLMGRLEAVDHDVYALQERARLLHEEIDSKLSSETNRHLYILSLMTAFLLPPSLVTGFFGMNTDELPFTVGTGGTMAASIFIVISVALAWFVLKRARIL GT:EXON 1|1-331:0| BL:SWS:NREP 1 BL:SWS:REP 32->331|ZNTB_ERWCT|1e-09|21.6|291/327| TM:NTM 3 TM:REGION 1->23| TM:REGION 271->293| TM:REGION 305->325| SEG 185->214|rderrrlaplrrtvvrlhrhlrtvltlmrr| RP:PDB:NREP 1 RP:PDB:REP 10->264|3ck6E|8e-17|11.5|235/238| RP:PFM:NREP 1 RP:PFM:REP 63->299|PF01544|7e-10|21.1|237/291|CorA| HM:PFM:NREP 1 HM:PFM:REP 40->327|PF01544|2.1e-63|26.7|288/292|CorA| GO:PFM:NREP 4 GO:PFM GO:0016020|"GO:membrane"|PF01544|IPR002523| GO:PFM GO:0030001|"GO:metal ion transport"|PF01544|IPR002523| GO:PFM GO:0046873|"GO:metal ion transmembrane transporter activity"|PF01544|IPR002523| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01544|IPR002523| RP:SCP:NREP 2 RP:SCP:REP 7->172|2bbhA1|2e-11|10.1|158/223|d.328.1.1| RP:SCP:REP 266->302|2bbjA2|4e-10|24.3|37/57|f.17.3.1| HM:SCP:REP 8->264|2iubA1|1.2e-35|25.3|253/0|d.328.1.1|1/1|CorA soluble domain-like| HM:SCP:REP 266->329|2iubA2|7.9e-13|26.6|64/0|f.17.3.1|1/1|Magnesium transport protein CorA, transmembrane region| OP:NHOMO 57 OP:NHOMOORG 56 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11----11-11--------------2--1---1--1111111111-1------------------------1111-----------------------------------1-------111111-111111-11111--111--------------1---1-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-11-----1---1--------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 253 STR:RPRED 76.4 SQ:SECSTR ########cccEEEEEccccEEcEEccccccccccccGccTTEEEEEETTcTTHHHHHHHTHTccHHHHHHHTccccccEEEEccTTcEEEEEEcccccTTccTTcEEEEEEEETTEEEEEEccccHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccTTcGGGGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHTcHHHHHHHHHHHHHHHHHHHH###HHHHHHHHHHHHHHHHHH################################################################### DISOP:02AL 1-1,182-191| PSIPRED cccccccccHHEEEEEEEccccccEEccccccHHHHcccccEEEEEcccccHHHHHHHHHHccccHHHHHHHHccccccEEEEEccEEEEEEEccccccccccEEEEEEEEEEEccEEEEEEcccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc //