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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86557.1
DDBJ      :             deacetylase
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  427/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.42.1
:311 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->292 1zz0A PDBj 1e-41 36.7 %
:RPS:PDB   3->309 3c0zA PDBj 1e-69 34.0 %
:RPS:SCOP  1->305 1t64A  c.42.1.2 * 9e-67 18.0 %
:HMM:SCOP  1->310 1t64A_ c.42.1.2 * 1.9e-96 40.3 %
:RPS:PFM   20->305 PF00850 * Hist_deacetyl 6e-64 45.9 %
:HMM:PFM   17->306 PF00850 * Hist_deacetyl 3.2e-93 45.5 286/306  
:BLT:SWISS 11->300 Y245_SYNY3 2e-55 42.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86557.1 GT:GENE AAK86557.1 GT:PRODUCT deacetylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(746187..747122) GB:FROM 746187 GB:TO 747122 GB:DIRECTION - GB:PRODUCT deacetylase GB:PROTEIN_ID AAK86557.1 GB:DB_XREF GI:15155719 LENGTH 311 SQ:AASEQ MATRLYEHPIFLEHITPEGHPERPDRLRSLNIALEHPNFERLDRKEAPQANEDAVLLAHPEEHLLAVMRQVPEEDGEINRIESDTYLSPKSLQAALTGIGAAMAAVDDVFSGAADNVFVAARPPGHHAETAKAMGFCLFNNVAIAARHAQKAHGAERIAIIDWDVHHGNGTQDIFWNDISVLFCSTHQMPLYPWSGDKNETGVKNNIVNAPLSPNTGSDHFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPLAQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAAMHILRMMKG GT:EXON 1|1-311:0| BL:SWS:NREP 1 BL:SWS:REP 11->300|Y245_SYNY3|2e-55|42.2|282/304| SEG 94->105|aaltgigaamaa| BL:PDB:NREP 1 BL:PDB:REP 20->292|1zz0A|1e-41|36.7|270/367| RP:PDB:NREP 1 RP:PDB:REP 3->309|3c0zA|1e-69|34.0|303/383| RP:PFM:NREP 1 RP:PFM:REP 20->305|PF00850|6e-64|45.9|283/304|Hist_deacetyl| HM:PFM:NREP 1 HM:PFM:REP 17->306|PF00850|3.2e-93|45.5|286/306|Hist_deacetyl| RP:SCP:NREP 1 RP:SCP:REP 1->305|1t64A|9e-67|18.0|295/364|c.42.1.2| HM:SCP:REP 1->310|1t64A_|1.9e-96|40.3|300/364|c.42.1.2|1/1|Arginase/deacetylase| OP:NHOMO 2210 OP:NHOMOORG 675 OP:PATTERN 11121122333333331111111311111121--1-1-------1-225-1111111111----21-- -131-1---------11--------1----------2111111111111---111111--111-2111111-----------322111---------------1111-21--------------------------33333111121132221212211111-21122222------------2112211--111111111111111111111111111111111------111111111111111111--11----------------------------------------------------------------------1------------------------------111111311121--11---2113221-----122221111122111111111112-23313212151-211122222211211-12314444326--------1-----12-----------------------------11-2--34333333434155653312555544442323312222232221351412221111221111111-11122-2342121111111112111112-11-13133--------------------1--11111--23-2222111111-1-111-1111--1---1312-------------------------------------------111--11-----------------1----------------------------------11212-----------------------1-1133332534224221-1----------2111-11111111111111111111------1-222222------------------------------------11--1-1---11- 33334431B3213463444444444344434444444434343333444444432344444445555536555365555556665633-7754566665573577624I4CCHDG9964658A7QG8L6f*H3HAE5576D69B549A64F32G8D9A9448487829587AA7549A8i997ABABFC49A9797B86 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 307 STR:RPRED 98.7 SQ:SECSTR ##EEEEccGGGGGcccTTcccccTHHHHHHHHHHHTTcGGGcEEEccccccHHHHTTTccHHHHHHHHccTTccccccHHcccccccTTTHHHHHHHHHHHHHHHHHHHHTTcccEEEEccccccTTccTTcccTTccccHHHHHHHHHHHHcTTccEEEEEccccccHHHHHHHTTcTTEEEEEEEEcccTTccccTTccccGEEEEcccccccccHHHHHHHHHHTHHHHHHHHcccEEEEEEccTTcTTcGGccccccHHHHHHHHHHHTTcHGcGGGGcEEEEEcccccHHHHHHHHHHHHHHHH## DISOP:02AL 311-312| PSIPRED cccEEEccHHHHcccccccccccHHHHHHHHHHHHHccccccEEEEcccccHHHHHHcccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHccccEEEEEEEcccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHcc //