[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86588.1
DDBJ      :             peroxiredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  260/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:161 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->161 2vl3A PDBj 1e-28 43.3 %
:RPS:PDB   6->161 2b7jA PDBj 2e-10 10.3 %
:RPS:SCOP  3->161 1h4oA  c.47.1.10 * 6e-44 43.3 %
:HMM:SCOP  1->161 1tp9A1 c.47.1.10 * 3.3e-35 35.2 %
:RPS:PFM   5->74 PF00578 * AhpC-TSA 2e-04 36.9 %
:HMM:PFM   5->157 PF08534 * Redoxin 1.1e-39 48.9 141/146  
:BLT:SWISS 2->161 PR2E1_ORYSJ 2e-30 46.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86588.1 GT:GENE AAK86588.1 GT:PRODUCT peroxiredoxin GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(775662..776147) GB:FROM 775662 GB:TO 776147 GB:DIRECTION - GB:PRODUCT peroxiredoxin GB:PROTEIN_ID AAK86588.1 GB:DB_XREF GI:15155756 LENGTH 161 SQ:AASEQ MTIKIGEKLPSATFKEKTADGPVETTTDALFGGKKVVLFAVPGAFTPTCSLNHLPGYLENRDAILAKGVDDIAVVSVNDWHVMGAWAQSSGGQGKIHFLADWDASFTKALGLDADLSGGGLGVRSKRYSMLVEDGVVKSLNVEENPGQATVSAAAAMIEQL GT:EXON 1|1-161:0| BL:SWS:NREP 1 BL:SWS:REP 2->161|PR2E1_ORYSJ|2e-30|46.5|159/232| SEG 109->122|algldadlsggglg| BL:PDB:NREP 1 BL:PDB:REP 3->161|2vl3A|1e-28|43.3|157/162| RP:PDB:NREP 1 RP:PDB:REP 6->161|2b7jA|2e-10|10.3|145/158| RP:PFM:NREP 1 RP:PFM:REP 5->74|PF00578|2e-04|36.9|65/122|AhpC-TSA| HM:PFM:NREP 1 HM:PFM:REP 5->157|PF08534|1.1e-39|48.9|141/146|Redoxin| GO:PFM:NREP 2 GO:PFM GO:0016209|"GO:antioxidant activity"|PF00578|IPR000866| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00578|IPR000866| RP:SCP:NREP 1 RP:SCP:REP 3->161|1h4oA|6e-44|43.3|157/161|c.47.1.10| HM:SCP:REP 1->161|1tp9A1|3.3e-35|35.2|159/0|c.47.1.10|1/1|Thioredoxin-like| OP:NHOMO 624 OP:NHOMOORG 425 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------1111111-------1--11--1111-1-----1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------211111111-11111111111111111111111-111111111211122222311122112111122122122--------1---1-11-----------------------------11121-222221111111111111121111111112222111111111112111111-----111111111-----------------------------------1---------------------------1111-2--212221-11111-111111-11-1---121----------11-1------------------------------------------------------1---------111111111111---1---------1212211111111111-111--------11-----------111-----1111111111111122222221111111111111--------------------------------------------------------------- 11--111-1---111232233333333222212222-111111222332222222221221222412122112331111122222511-24132221-11112332-1313-211121-1--11221111B1-211-1-11-111-11--11-11--11----42312111--121312111232648526532----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 160 STR:RPRED 99.4 SQ:SECSTR #cccTcccccccccEEEETTcEEcEEEGGGGTTccEEEEEEcTTccTHHHHHHHHHHHHHHHHHHHHHccccEEEEccTTTccHHHHHHHGGGccTTccHHHHHHHHHcHHTTcEEHTTcccTTcccEEEEcTTccEEEEEcTTccTTHHHHHHHHHHHHc DISOP:02AL 161-162| PSIPRED cccccccccccEEEEEEcccccEEEEcHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHccccccEEEEEcccHHHHHHcccccccccccccEEEEEEEEEEcccEEEEEEEcccccccccccHHHHHHHc //