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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86619.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.43.1
:93 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   3->93 2cadA PDBj 4e-12 11.0 %
:RPS:SCOP  5->42 2bj1A1  a.43.1.3 * 2e-05 28.9 %
:HMM:SCOP  4->51 1q5vA1 a.43.1.3 * 1.7e-08 39.6 %
:RPS:PFM   8->75 PF03693 * RHH_2 1e-04 52.5 %
:HMM:PFM   7->84 PF03693 * RHH_2 1.7e-12 33.8 74/81  
:BLT:SWISS 8->84 Y1995_MYCBO 6e-06 34.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86619.1 GT:GENE AAK86619.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(809876..810157) GB:FROM 809876 GB:TO 810157 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAK86619.1 GB:DB_XREF GI:15155793 LENGTH 93 SQ:AASEQ MANVEKISVSMTPQHAEILRDAVESGAYASSSEVIREAMRDWSAKWVQRRNDITKLRALWSEGKASGNSTEVDFDETLNEARAELASLKNRDH GT:EXON 1|1-93:0| BL:SWS:NREP 1 BL:SWS:REP 8->84|Y1995_MYCBO|6e-06|34.2|73/83| RP:PDB:NREP 1 RP:PDB:REP 3->93|2cadA|4e-12|11.0|91/131| RP:PFM:NREP 1 RP:PFM:REP 8->75|PF03693|1e-04|52.5|61/76|RHH_2| HM:PFM:NREP 1 HM:PFM:REP 7->84|PF03693|1.7e-12|33.8|74/81|RHH_2| RP:SCP:NREP 1 RP:SCP:REP 5->42|2bj1A1|2e-05|28.9|38/50|a.43.1.3| HM:SCP:REP 4->51|1q5vA1|1.7e-08|39.6|48/48|a.43.1.3|1/1|Ribbon-helix-helix| OP:NHOMO 14 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1---------------1--------111-----22--------------------------------1-------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 91 STR:RPRED 97.8 SQ:SECSTR ##ccccccccccHHHHHHHHHHHHHHTcccHHHHHHHHHHHHccccccccEEEEEEEEEETTcTTHHHHHHHHHHHcccEEEEEEEEEccccE DISOP:02AL 1-2, 83-93| PSIPRED cccccEEEEEccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccc //