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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86651.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  194/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.160.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   259->301 1y7mA PDBj 6e-07 47.6 %
:RPS:SCOP  162->301 1zatA1  b.160.1.1 * 1e-24 16.4 %
:HMM:SCOP  156->303 1y7mA1 b.160.1.1 * 1.3e-31 37.4 %
:RPS:PFM   163->300 PF03734 * YkuD 1e-07 34.4 %
:HMM:PFM   164->301 PF03734 * YkuD 1.1e-18 28.7 108/116  
:BLT:SWISS 199->302 YAT5_RHOBL 4e-12 35.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86651.2 GT:GENE AAK86651.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 846354..847262 GB:FROM 846354 GB:TO 847262 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86651.2 GB:DB_XREF GI:159139803 LENGTH 302 SQ:AASEQ MIALLLKNGRRAASLLGLALLPLMSGCLFVTDTTRMDPDVFVRETAPVFNFNSVSSNRQPELPPQPGQLSTRPPDLFRTRFHQEYGPPVRGQGLQAPQVQGYNVPQAQGQTMAYGLPVSNPLHRVMYGPIRDEDRSLPAIPYGRIDPRYLRQEVSYQTAEAPGTIVVDTRQHFLYLVQSGGKAIRYGVGLGRDGYAWSGRGKIQWKAKWPRWTPPDEMVKRQPELTSISAANGGMTPGLNNPLGARALYIFKDGKDTLYRVHGTPDWQSVGKATSSGCVRMLNQDVIDLYERVPQGAQIVVI GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 199->302|YAT5_RHOBL|4e-12|35.5|93/189| SEG 9->28|grraasllglallplmsgcl| BL:PDB:NREP 1 BL:PDB:REP 259->301|1y7mA|6e-07|47.6|42/161| RP:PFM:NREP 1 RP:PFM:REP 163->300|PF03734|1e-07|34.4|125/136|YkuD| HM:PFM:NREP 1 HM:PFM:REP 164->301|PF03734|1.1e-18|28.7|108/116|YkuD| RP:SCP:NREP 1 RP:SCP:REP 162->301|1zatA1|1e-24|16.4|116/126|b.160.1.1| HM:SCP:REP 156->303|1y7mA1|1.3e-31|37.4|115/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 560 OP:NHOMOORG 195 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------1------------------------------------------------------------1111111--11-1-211--1-1122-----------------------------------------------111---------------------------------------------------------------------------------------------------------------------------------------------------------1-----1111168B9966788A9855554454548-ADAAE89A78--677598A9898867---A136566323--------------------------------------------------------------------------------------------------------------------11-------------------212-1----21-1-------------------------------22----------1111-11---1-1--1----111--------21-1-1-1112122111-1111111121111111111111-----1111111111111111-1111111-1----------------11111----1-----------------------------1-111111-111111-111-------------1-------1------------------1-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 167 STR:RPRED 55.3 SQ:SECSTR #####################################################################################################################################ccccTTcEEEEETTEEEEEccTTcccEEEccTccccccccEEEEEccccTTcEEEEETTTEEEEEccTTcccEEcTTcTTTcEEEEEEEEccccTTcccEEEEEEEccTTcccEEEEEccTTcccEEcccccTTccTccEEEcccEEc#HHHHHHHHHHccTTcEEEE# DISOP:02AL 6-7,88-133| PSIPRED cEEEEEccccHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccccccccccccEEEccccccEEEEEEEEcccccccccccccccccccccccccccHHHccccccHHHHHHcccccccccccccccHHHccHHHHccEEcccccccccEEEEEccccEEEEEEccEEEEEEEcccccccccccEEEEEEEEEEcccccccHHHHHHccccccccccccccccccccccccEEEEEcccccccEEEEEccccccccccccccccEEccHHHHHHHHHHcccccEEEEc //