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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86705.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.6.2
:248 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   48->240 2cc0A PDBj 9e-19 19.8 %
:RPS:SCOP  48->240 2cc0A1  c.6.2.3 * 4e-19 19.8 %
:HMM:SCOP  43->240 2cc0A1 c.6.2.3 * 2.8e-24 28.4 %
:RPS:PFM   45->172 PF01522 * Polysacc_deac_1 7e-07 30.4 %
:HMM:PFM   43->175 PF01522 * Polysacc_deac_1 4.8e-20 28.3 120/124  
:BLT:SWISS 33->222 YLXY_BACSU 4e-05 24.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86705.1 GT:GENE AAK86705.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 891150..891896 GB:FROM 891150 GB:TO 891896 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK86705.1 GB:DB_XREF GI:15155893 LENGTH 248 SQ:AASEQ MTLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTDHRILDTLVRERIPATIFVTARWLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIYGIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKYTASSMATINRLGMRVAGYSVNGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDDPSFAPPGN GT:EXON 1|1-248:0| BL:SWS:NREP 1 BL:SWS:REP 33->222|YLXY_BACSU|4e-05|24.7|174/319| SEG 12->27|lllaalfasaasiafa| SEG 190->200|aamtakhiaaa| RP:PDB:NREP 1 RP:PDB:REP 48->240|2cc0A|9e-19|19.8|177/192| RP:PFM:NREP 1 RP:PFM:REP 45->172|PF01522|7e-07|30.4|115/123|Polysacc_deac_1| HM:PFM:NREP 1 HM:PFM:REP 43->175|PF01522|4.8e-20|28.3|120/124|Polysacc_deac_1| GO:PFM:NREP 2 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01522|IPR002509| GO:PFM GO:0016810|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"|PF01522|IPR002509| RP:SCP:NREP 1 RP:SCP:REP 48->240|2cc0A1|4e-19|19.8|177/192|c.6.2.3| HM:SCP:REP 43->240|2cc0A1|2.8e-24|28.4|183/0|c.6.2.3|1/1|Glycoside hydrolase/deacetylase| OP:NHOMO 34 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- --------------------------------------1--1----------1--------1-------------------------1--------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-111-1--1----------1--111111-111------------------------------1----------------------------------------------------------------------------------------1------------------------------111----111--1--------1-----------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 196 STR:RPRED 79.0 SQ:SECSTR #####################################HHHHHTccEEEEEEEEccccTTHHHHHHHHHHTTcccEEEEcHHHHHHcHHHHHHHHHHHTTcEEEEcccccccGGGcc#######GGccHHHHHHHHHHHHHHHHHTTcccccEEccGGGcccHHHHHHHHHTTcEEccccEEccGGGTccHHHHHHHHHTccTTcEEEEEcccHHHHHHHHHHHHHHHHHHTTEEEcEEcT######## DISOP:02AL 1-6, 244-248| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccccccHHHHHHHHHccccEEEEEEcHHHHHcHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccccccc //