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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86736.1
DDBJ      :             penicillin binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  832/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.2.1e.3.1
:757 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   144->639 3dwkC PDBj 9e-39 30.5 %
:RPS:PDB   124->676 3dwkB PDBj 6e-92 25.1 %
:RPS:SCOP  126->324 2oluA1  d.2.1.10 * 2e-47 33.5 %
:RPS:SCOP  310->676 2bg1A1  e.3.1.1 * 4e-55 19.2 %
:HMM:SCOP  288->671 2bg1A1 e.3.1.1 * 2.8e-105 42.4 %
:RPS:PFM   146->307 PF00912 * Transgly 2e-42 51.2 %
:RPS:PFM   396->640 PF00905 * Transpeptidase 1e-38 45.0 %
:HMM:PFM   142->306 PF00912 * Transgly 2.6e-65 52.7 165/178  
:HMM:PFM   396->664 PF00905 * Transpeptidase 1.8e-31 29.0 259/304  
:BLT:SWISS 128->666 PBPF_BACSU 1e-67 31.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86736.1 GT:GENE AAK86736.1 GT:PRODUCT penicillin binding protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(920246..922519) GB:FROM 920246 GB:TO 922519 GB:DIRECTION - GB:PRODUCT penicillin binding protein GB:PROTEIN_ID AAK86736.1 GB:DB_XREF GI:15155930 LENGTH 757 SQ:AASEQ MVLRREWVETQKYRRAALPRTGKHRQVQEEKDDNKGRRKRHILLRIDSFIDSGLWTAAARLVDFWEDVTIASRKLHVRGWKKLVVNLTCDALTFGTAGSIVLLALAMPAFEETKKDWRYRGDFAVTFLDRYGNTIGHRGIIHEDSVPIDQMPDHFIKAVLATEDRRFFDHFGIDFIGLARAMSENARAGGVVQGGSTLTQQLAKNLFLTNERSLERKIKEAFLALWLESNMSKKEILSLYLDRAYMGGGTFGAAAAAQFYFGKNLTDVTLSESAILAGLFKAPAKYAPHVNLPAARARANTVLSNLVQSGLMTEGQVIGARRNPATVIDRADVKAPDYFLDWAFDEVQRLAAEGKFKDHTVVVRTTIDTGLQQAAEQAMEMELREYGEGYRVKQGAMVMIENGGGVRAMVGGRDYGESQFNRATAALRQPGSSFKVYTYSAAMEKGMKPDTLISDAPVTWRGWSPQNYGRSYAGKVTLQVALAKSYNTVPVRLAKDVLGTQVIVDTAKAMGVATPLRSDKTIPLGTSEVTVLDQATAYAVFPADGMQSRRHGIEQVMDYEGNVLYDFSHDEPPAKRVLSEEANSKMNQMLVTIPVMGTARRGALDNGIVSGGKTGTSQAYRDAWYVGFTGNYTTAVWFGNDEFTPMNNMTGGALPAMTYKRLMDYAHQGMELRPIPGIQNLLPTGARPQPSAQVAAASATTAPAMPALTRPRSLSAEATRVIRSIAKTMKEAPPLAVTTQKVAEATIRDGRDEAGRR GT:EXON 1|1-757:0| BL:SWS:NREP 1 BL:SWS:REP 128->666|PBPF_BACSU|1e-67|31.5|533/714| SEG 247->262|gggtfgaaaaaqfyfg| SEG 686->712|arpqpsaqvaaasattapampaltrpr| BL:PDB:NREP 1 BL:PDB:REP 144->639|3dwkC|9e-39|30.5|488/623| RP:PDB:NREP 1 RP:PDB:REP 124->676|3dwkB|6e-92|25.1|545/621| RP:PFM:NREP 2 RP:PFM:REP 146->307|PF00912|2e-42|51.2|162/178|Transgly| RP:PFM:REP 396->640|PF00905|1e-38|45.0|240/289|Transpeptidase| HM:PFM:NREP 2 HM:PFM:REP 142->306|PF00912|2.6e-65|52.7|165/178|Transgly| HM:PFM:REP 396->664|PF00905|1.8e-31|29.0|259/304|Transpeptidase| GO:PFM:NREP 5 GO:PFM GO:0003824|"GO:catalytic activity"|PF00912|IPR001264| GO:PFM GO:0009252|"GO:peptidoglycan biosynthetic process"|PF00912|IPR001264| GO:PFM GO:0009274|"GO:peptidoglycan-based cell wall"|PF00912|IPR001264| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 2 RP:SCP:REP 126->324|2oluA1|2e-47|33.5|182/208|d.2.1.10| RP:SCP:REP 310->676|2bg1A1|4e-55|19.2|360/452|e.3.1.1| HM:SCP:REP 288->671|2bg1A1|2.8e-105|42.4|354/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 2517 OP:NHOMOORG 840 OP:PATTERN -------------------------------------------------------------------- 333-322222222232222-23222422222234443344233322212222232111115523324645421222221131411111445214111--23443236515---------------2222212222222233---216333333233312122243224673111-11111-11232111124346666676666666665444446674434433222222443333333333333333333332223422323222233322222333333333333333333333333333333333333343333333331322111111211211211111131411322312333222522111212145-766422222555555545555533333333335-778789776541555566566667453444344344344111111111111333511----------22221222111121---1324524444478878756665774566663686467771222233344464442333222332222222222222453532133222222133333343355455434122131121121211111111111122443233322233444333233332422322--11213-1-11144333434444444444-4444444444444344444444334444444444444444443443332343143444544444411131111122223542433333313332322423333333333433334335444443444---------122232222233222444444433333331-136666661111111121--------------------------1-11111111--3 -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1--------------11-----1--3--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 560 STR:RPRED 74.0 SQ:SECSTR ###########################################################################################################################cEEEEcTTccEEEEEcccccccccGGGccHHHHHHHHHHHccccTTcccccHHHHHHTTTTcTTccccccccccHHHHHHHHTcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccTTcccHHHHHHHHTccccTTccHHHHHHHHHTTccHHHHcTTTcHHHHHHHHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccccccGGGHHHHHHHHHHTTcGGGccccHEEEEcccHHHHHHHHHHHHHccccccTTEccEEEEEEEEETTccEEEEEccTTccTTTcccTTTccEEcGGGGHHHHHHHHHHHcccTTcEEEcccccccccccccTTcccccEEEHHHHHHTTcHHHHHHHHHHHHHHHccTTHHHHHHHHTTcccccHTTcTTcEEcHHHHHHHHHHHTTTcEEEccccEEEEEcccccEEEccHHHcccEEEcccHHHHHHHHHHHHTTccTTcTTTTccccccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEccccGGGHHHHHTHHHHHHHHHHHHHccccccccccHHHHHHH########################################################################## DISOP:02AL 1-2, 20-40, 328-331, 710-712, 714-757| PSIPRED cccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccccccccEEEEEEEcccEEEEEcccccEEccHHHHcHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccEEcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcEEEcccccHHHHHHHHHHHcccHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHHHHHccHHHcEEEEEEccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHHcccccccEEEcccEEEccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccEEcccccccHHHHHHHHHHHHcccEEEcEEEEEEEEcccccEEEEcccccccccccccHHHHHHHHHHHHHHccccccccccccccccEEEEEccccccccEEEEEEcccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccc //