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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86779.2
DDBJ      :             two component response regulator
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  858/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:223 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->217 1ys7B PDBj 2e-35 47.0 %
:RPS:PDB   1->214 3c3wB PDBj 8e-27 22.3 %
:RPS:SCOP  1->107 1a0oA  c.23.1.1 * 1e-26 33.6 %
:RPS:SCOP  121->218 1ys6A1  a.4.6.1 * 6e-25 36.7 %
:HMM:SCOP  1->187 1s8nA_ c.23.1.1 * 1.3e-36 31.2 %
:RPS:PFM   3->107 PF00072 * Response_reg 1e-16 41.9 %
:RPS:PFM   145->216 PF00486 * Trans_reg_C 2e-14 48.6 %
:HMM:PFM   3->112 PF00072 * Response_reg 6.7e-26 34.5 110/112  
:HMM:PFM   145->216 PF00486 * Trans_reg_C 3.4e-25 47.2 72/77  
:BLT:SWISS 1->214 PHOP_SALCH 2e-43 40.7 %
:PROS 88->113|PS00217|SUGAR_TRANSPORT_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86779.2 GT:GENE AAK86779.2 GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 958852..959523 GB:FROM 958852 GB:TO 959523 GB:DIRECTION + GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK86779.2 GB:DB_XREF GI:159139861 LENGTH 223 SQ:AASEQ MRILVVEDDANLNRQLTDALKEAGYVVDQAFDGEEGHYLGDTEPYDAIVLDIGLPQLDGITVVEKWRAAGKAMPVLILTARDRWSDKVAGIDAGADDYVTKPFHVEEVLARVRALIRRAAGHASSELVCGPVRLDTKSSKATVNGTTLKLTSHEFRLLSYLMHHMGEVVSRTELVEHMYDQDFDRDSNTIEVFVGRLRKKIGVDLIETIRGLGYRMQAPADAK GT:EXON 1|1-223:0| BL:SWS:NREP 1 BL:SWS:REP 1->214|PHOP_SALCH|2e-43|40.7|214/224| PROS 88->113|PS00217|SUGAR_TRANSPORT_2|PDOC00190| SEG 108->120|vlarvralirraa| BL:PDB:NREP 1 BL:PDB:REP 20->217|1ys7B|2e-35|47.0|198/226| RP:PDB:NREP 1 RP:PDB:REP 1->214|3c3wB|8e-27|22.3|202/210| RP:PFM:NREP 2 RP:PFM:REP 3->107|PF00072|1e-16|41.9|105/111|Response_reg| RP:PFM:REP 145->216|PF00486|2e-14|48.6|72/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 3->112|PF00072|6.7e-26|34.5|110/112|Response_reg| HM:PFM:REP 145->216|PF00486|3.4e-25|47.2|72/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 1->107|1a0oA|1e-26|33.6|107/128|c.23.1.1| RP:SCP:REP 121->218|1ys6A1|6e-25|36.7|98/106|a.4.6.1| HM:SCP:REP 1->187|1s8nA_|1.3e-36|31.2|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 11383 OP:NHOMOORG 899 OP:PATTERN -----------------------------1-1---1--11-1-31-13-72-2--------------- 8IL7T466778655DDDCC-CG55CCCCCCCBIFFGBFHHDFDJCB688BB9DFG65722KIL7T8IRNR8444465558HB71547789JF-A22---44I59AP7J9G--------------242242245274OQQSTF7CT6rQfQQPCEHDE8679A8MEHHefqJ684554575545FE688342A6FUUVUVSTVHVSWWURHJ98BBUVb9CEV8HE988A8AiV7AA9A99899AAA9978996B675CC655466666CC655665686DDD967899966666676666666667777876597655476775TKKeQQQUUUVTRLEcWW9DFBMKF8ACHN73eYMC9755877686428GD9KIIC76666GDPNOFADEMFIOAA9AAAA999E-IJJHMMLOAMA1PKKMKIKPOLGGFM7DACBEJEJHAEABBBBBBBBCCB99MGC3321222211112333223223223212227CG56EFEBIVUWUYTRMMMHQQXWOMOOEOZUXPTQa12JPPSCOFEbKKOM6JPICCBDGD2322212985DRcCQSG99O98VHEDI2ZQaQNQVEEMLINXXDIMA887666656434544444HL8CK88KI8HIGM9HECLHNMKBLHNKKLJLHJNMN--25846------GFDFDFDEEEFEFFGDE-EGFDEEEDEFEEEEEEEECHHHCE889FEFFFFFFEFFFFFFFICBCCCDE91BDDEEEEDEEEE--2D3333344458DUCM423223244443125BA89B6A779HDVSWURWZcJVXYWLSSV2212132127EIIMEEEEEGINJKNRGEHEFCCC55451-P288668822222222312-------------------------59445777564J3 ----11--------41---1-----------------------------1-------1--------------------------------4--11-1---11--12--2-------------------------------------------------1----2-1-------4-112-------1--C---11B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 99.6 SQ:SECSTR EEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHTccHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccccEEEEEcHHHHHHHHHTccHHHHHHHHHHHHHHTTccHHHHHHHHTcccccTTTT# DISOP:02AL 121-125,219-224| PSIPRED cEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccccccEEEccEEEEcccEEEEEccEEEcccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHcccccEEEEcccEEEEccccccc //