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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86838.2
DDBJ      :             GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  848/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
a.211.1c.1.12d.15.10d.218.1d.58.18
:744 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->339 1vj7A PDBj 6e-78 47.8 %
:BLT:PDB   390->450 3hvzA PDBj 1e-13 46.7 %
:RPS:PDB   23->206 1a0cA PDBj 9e-29 9.8 %
:RPS:PDB   181->397 2be3A PDBj 3e-39 24.6 %
:RPS:PDB   368->452 2dwqA PDBj 1e-16 18.8 %
:RPS:PDB   449->541 3c39A PDBj 5e-04 27.3 %
:RPS:PDB   594->741 3ddnB PDBj 5e-15 9.9 %
:RPS:SCOP  21->224 1fiyA  c.1.12.3 * 2e-55 12.3 %
:RPS:SCOP  195->346 1vj7A2  d.218.1.8 * 9e-52 40.0 %
:RPS:SCOP  395->450 1nyqA2  d.15.10.1 * 5e-19 26.8 %
:RPS:SCOP  650->744 1phzA1  d.58.18.3 * 3e-10 13.2 %
:HMM:SCOP  1->191 1vj7A1 a.211.1.1 * 7.9e-72 53.9 %
:HMM:SCOP  180->396 2be3A1 d.218.1.8 * 2.6e-65 50.0 %
:HMM:SCOP  379->452 1wxqA2 d.15.10.2 * 1.8e-22 45.9 %
:HMM:SCOP  666->742 2fgcA2 d.58.18.6 * 2e-08 27.3 %
:RPS:PFM   236->345 PF04607 * RelA_SpoT 7e-33 57.4 %
:RPS:PFM   396->450 PF02824 * TGS 3e-11 43.6 %
:RPS:PFM   566->631 PF01339 * CheB_methylest 5e-06 34.9 %
:HMM:PFM   236->345 PF04607 * RelA_SpoT 2.3e-36 38.0 108/112  
:HMM:PFM   392->450 PF02824 * TGS 2e-22 40.7 59/60  
:HMM:PFM   45->144 PF01966 * HD 3.5e-10 25.8 97/118  
:HMM:PFM   671->733 PF01842 * ACT 0.00044 25.8 62/66  
:BLT:SWISS 1->741 RSH_BRUO2 0.0 68.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86838.2 GT:GENE AAK86838.2 GT:PRODUCT GTP pyrophosphohydrolase/synthetase, RelA/SpoT family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1022661..1024895 GB:FROM 1022661 GB:TO 1024895 GB:DIRECTION + GB:PRODUCT GTP pyrophosphohydrolase/synthetase, RelA/SpoT family GB:PROTEIN_ID AAK86838.2 GB:DB_XREF GI:159139888 LENGTH 744 SQ:AASEQ MMRQYELVERVQKYKPDANEALLNKAYVYAMQKHGQQKRANGDPYISHPLEVAAILTEMHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTMEYMPADKRSRISEETMEIYAPLAGRMGMQDMRDELEDLSFRYLNPEAYETVTNRLLELETRNEGLIKKIEDELRELLVANGLLGTHVKGRQKKPYSVFRKMQSKSLSFEQLSDVYGFRILVDDIPGCYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTIVGPSRQRIELQIRTKRMHEIAEFGIAAHALYKDGENGEGDLLSKESNAYSWLRHTIESLAEGDSPEEFLEHTKLELFQDQVFCFTPKGKLIALPRGATPIDFAYAVHTNIGDTTVGAKINGRIMPLVTRLNNGDEVEIIRSGVQVPPAAWEEVVVTGKARSAIRRATRMAIRKQYSGLGYRILERTFERAGKAFSREALKPVLHRLAQKDVEDAIAAVGRGEVSSLDVLRAVFPDYQDERVTVKMTGDDGWFNMRSASGMVFKIPGKSRSVLEDDGAAEMLDGPDPLPIRGLSGNVDVHFSAAGAVPGDRIVGIMEKGKGITIYPIQAPALQRFDDEPERWIDVRWDLDEANKSRFMARVMINALNEPGTLASVAQSIATLDVNIRGLNMVRIGTDFSELALDVEVWDLRQLNQLLSQLKDLDCVSTVARAFD GT:EXON 1|1-744:0| BL:SWS:NREP 1 BL:SWS:REP 1->741|RSH_BRUO2|0.0|68.1|740/750| BL:PDB:NREP 2 BL:PDB:REP 6->339|1vj7A|6e-78|47.8|312/326| BL:PDB:REP 390->450|3hvzA|1e-13|46.7|60/63| RP:PDB:NREP 5 RP:PDB:REP 23->206|1a0cA|9e-29|9.8|173/437| RP:PDB:REP 181->397|2be3A|3e-39|24.6|183/197| RP:PDB:REP 368->452|2dwqA|1e-16|18.8|85/354| RP:PDB:REP 449->541|3c39A|5e-04|27.3|88/396| RP:PDB:REP 594->741|3ddnB|5e-15|9.9|142/525| RP:PFM:NREP 3 RP:PFM:REP 236->345|PF04607|7e-33|57.4|108/112|RelA_SpoT| RP:PFM:REP 396->450|PF02824|3e-11|43.6|55/60|TGS| RP:PFM:REP 566->631|PF01339|5e-06|34.9|63/181|CheB_methylest| HM:PFM:NREP 4 HM:PFM:REP 236->345|PF04607|2.3e-36|38.0|108/112|RelA_SpoT| HM:PFM:REP 392->450|PF02824|2e-22|40.7|59/60|TGS| HM:PFM:REP 45->144|PF01966|3.5e-10|25.8|97/118|HD| HM:PFM:REP 671->733|PF01842|0.00044|25.8|62/66|ACT| GO:PFM:NREP 6 GO:PFM GO:0015969|"GO:guanosine tetraphosphate metabolic process"|PF04607|IPR007685| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF01339|IPR000673| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF01339|IPR000673| GO:PFM GO:0005737|"GO:cytoplasm"|PF01339|IPR000673| GO:PFM GO:0006935|"GO:chemotaxis"|PF01339|IPR000673| GO:PFM GO:0008984|"GO:protein-glutamate methylesterase activity"|PF01339|IPR000673| RP:SCP:NREP 4 RP:SCP:REP 21->224|1fiyA|2e-55|12.3|203/874|c.1.12.3| RP:SCP:REP 195->346|1vj7A2|9e-52|40.0|150/154|d.218.1.8| RP:SCP:REP 395->450|1nyqA2|5e-19|26.8|56/59|d.15.10.1| RP:SCP:REP 650->744|1phzA1|3e-10|13.2|91/97|d.58.18.3| HM:SCP:REP 1->191|1vj7A1|7.9e-72|53.9|191/192|a.211.1.1|1/1|HD-domain/PDEase-like| HM:SCP:REP 180->396|2be3A1|2.6e-65|50.0|192/0|d.218.1.8|1/1|Nucleotidyltransferase| HM:SCP:REP 379->452|1wxqA2|1.8e-22|45.9|74/0|d.15.10.2|1/1|TGS-like| HM:SCP:REP 666->742|2fgcA2|2e-08|27.3|77/0|d.58.18.6|1/1|ACT-like| OP:NHOMO 1477 OP:NHOMOORG 890 OP:PATTERN -------------------------------------------------1------------------ 1211111111111111111-1111111111112111111112221111111111111111221111122211111111121111111122221222G--11111111111---------------1111111112111122111111121111111111111113122232111111111111111111111111111111222121211111111221111212222222121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111-11111111-111111111111111112112211111111111-12122111111-1111111111111111111111111111111111111111311----------Ob43AA53D53-344----1112112212222222222222222322222223222222222222222222222222222122222222211222211113111111111111121112211111233111111111111111111111111111222222223222222222222222222222--22222------22332232222222222-2212222222222222222222222222222222222232222322222222-222222222222--22222222222223222122222222222222222222222222222222222222222222222222222222222222222222222222222222112-1-111111111111--111111---1--11----111--1111111111111--- ----1-1-----111---------------------------------------------------------------------------------1-1---------7---1111----------------------------------------112----31--12--11-14124V444439768-6424----5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 740 STR:RPRED 99.5 SQ:SECSTR HHHHHHHHHTccccccHHHHHHTTcTTTEEEEEEHHHHHHTTccHHHHHHHHHHTTcEEEEEccHHHHcccTTcccccccccccHHHHHHHHHHHHHcTTGGGccEEEEEEETTEEEEEEEcTTTTccccEEEEEEEccccccGGGTGGccTTHHHHGGGGcccEEEcccccccccccccHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEETTTccTEEEEEEccHHHHHHHHHHTccTHHHcTTcEEEEEEGGGHHHHHHEcHHHTcccEEEEHHEEETTTTccTTccccEEEEETccEEEEEEEEEEEHHHHHHHHHHHHHHHHHTTccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHTTHHHHHHHHHHcccccccEEEETTccHHHHHHHHccHHHHTEEEEEEEEEEEcTTccccTTEEEEEEEccccccETccETTEEcccHHTTHHHTHHHHHHHHHTTccEEEEEcccccTTcccTTTccHHHHHHHHHHHHHHHHHcccTTEETHHHHHHHHHTTccTTccEEEEEcccTTHHHHHHTTEEEEccTTcEEEEEEETTEEEEETTTHHHHHHTTTcEEEEEEEcccccccEEEEEEEEETTccEETTEEEEEEETTTTEEEEEEETTE#EEEEEEcccEEEEEEEEccTTHHHHHHHHHHHTTccEEEEEEEEccccEEcEEEEEEEEcccccHHHHHHHHHHHTccEEEE### DISOP:02AL 347-353,571-591| PSIPRED cccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHcccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHccccHHHEEEEEEEEEEEccHHHHHHHHHHHHHHcccccccHHHHccccccccccEEEEEEEcccccEEEEEEccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEcccccEEEccccccHHHHHHHHcHHHHHHEEEEEEccEEcccccccccccEEEEEEcccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccccccEEEEcccccccEEcccccccccccEEEEEEcccEEEEEccccHHHHHHHHccccEEEEEcccccccccEEEEEEEEEEEccccHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEccHHHHHHHHHHHHccccEEEEEEEcc //