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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK86945.1
DDBJ      :             permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  371/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:385 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   37->314 PF01594 * UPF0118 2e-37 33.8 %
:HMM:PFM   15->344 PF01594 * UPF0118 2.2e-71 32.3 319/327  
:BLT:SWISS 51->314 YRRI_BACSU 2e-21 25.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86945.1 GT:GENE AAK86945.1 GT:PRODUCT permease GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1130984..1132141 GB:FROM 1130984 GB:TO 1132141 GB:DIRECTION + GB:PRODUCT permease GB:PROTEIN_ID AAK86945.1 GB:DB_XREF GI:15156177 LENGTH 385 SQ:AASEQ MQPHVSGTSLRRQVFFWIGVLAVFVLFLMVFSSILLPFVAGMALAYFLDPVADWLERRGLSRLMATVVILVSFVLIFALSLIIIIPLIVAQASEFITRIPQYISSLQQLIAGADTNLLPDWVSGQINSVKENFSKLLTEGAGFIGTLLTQIWNSGKSLVDVLSLLVVTPVVAFYLLLDWDRMIDKVDSWIPRDYVHTVRQIARDMDKTIAGFVRGQGSLCLILGVYYAVGLSLVGLNFGLLIGLFSGLISFIPYIGSMVGLILAVGVAIVQFWPDYIYVFLTLVVFFSGQFIEGNILQPKLVGKSVGLHPVWLMFALFAFGALFGFVGLLVAVPAAAAVGVLVRFALSRYLESDLYHGHAANLPWDANPALEEREASAGKIDSQS GT:EXON 1|1-385:0| BL:SWS:NREP 1 BL:SWS:REP 51->314|YRRI_BACSU|2e-21|25.4|256/353| TM:NTM 6 TM:REGION 22->44| TM:REGION 66->88| TM:REGION 216->238| TM:REGION 247->269| TM:REGION 272->293| TM:REGION 319->341| SEG 20->36|vlavfvlflmvfssill| SEG 158->171|lvdvlsllvvtpvv| SEG 238->252|fglliglfsglisfi| SEG 315->343|falfafgalfgfvgllvavpaaaavgvlv| RP:PFM:NREP 1 RP:PFM:REP 37->314|PF01594|2e-37|33.8|272/328|UPF0118| HM:PFM:NREP 1 HM:PFM:REP 15->344|PF01594|2.2e-71|32.3|319/327|UPF0118| OP:NHOMO 458 OP:NHOMOORG 372 OP:PATTERN -------------------------------------------------------------------- -----1-------1------------------------------------1-------------------1-----------1-----------11----------------------------------1---11111-1-----------111------------111--------------1------11322222222222222222222222211-121211111-11222222222222222211213121221-11111--22211221111111111122222222222222111111111111121111-1111131-1-------1--12---332-11-1---1-11-1111-11111---1-------1111111------------1111111111-11111111111-11111111111111---1111111111--------1---11111111111111--1111111111111111-------------------------11--------1111-1111-1------1------1-11-1111111111-11------11---------2-1322-1----1----------------------------111------1-1-1-----1--------------13--2-------1---1-------------------------------111--11-----------------1---------1-------------11-----------11-1111--11-11-11-1111111111------1111111111111-11111111---------------11111111111111----------------------------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 364-385| PSIPRED ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHccccccccccc //