[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87003.1
DDBJ      :             ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  906/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:337 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->272 3dhwC PDBj 4e-30 34.5 %
:RPS:PDB   41->270 3dmdC PDBj 6e-45 6.8 %
:RPS:SCOP  25->272 1b0uA  c.37.1.12 * 6e-41 26.2 %
:HMM:SCOP  52->317 1a7jA_ c.37.1.6 * 4.3e-69 41.8 %
:RPS:PFM   111->196 PF00005 * ABC_tran 9e-11 43.4 %
:RPS:PFM   247->309 PF08352 * oligo_HPY 3e-08 45.2 %
:HMM:PFM   68->196 PF00005 * ABC_tran 3.9e-21 33.3 117/118  
:HMM:PFM   247->312 PF08352 * oligo_HPY 2.3e-17 37.5 64/64  
:HMM:PFM   44->86 PF03193 * DUF258 0.00025 28.6 42/161  
:BLT:SWISS 20->332 Y3864_BRUME 1e-64 47.7 %
:PROS 168->182|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87003.1 GT:GENE AAK87003.1 GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1193640..1194653 GB:FROM 1193640 GB:TO 1194653 GB:DIRECTION + GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK87003.1 GB:DB_XREF GI:15156245 LENGTH 337 SQ:AASEQ MMFSKAMTQMPPSAENGSRPYVVAKNLCKYYPISGLGHRVVKSVDDVSLTIGEGEVLGLVGESGCGKSTVAGLITRLTHATRGEVSIGDHDILHMQGEALRRVRRVVQLVFQDPYSALDPRMRIGQSMEAPLAQHGIGTRAERTARVFRMLEEVGLDGSFYDRYPNQCSGGQLQRVVIGRALLLNPSFLVCDEPTSALDASMRTQILNLLMDMKRRHGLTVLMISHDLRVVRYLCDRIAVMYLGRIVEIADREELFRAPKHPYTKALIASSMLDETGLYAPEMLLDGDLPSPLNPPGGCKFHTRCKYATAICGEVEPVLEGVSGEHFARCHRWRELG GT:EXON 1|1-337:0| BL:SWS:NREP 1 BL:SWS:REP 20->332|Y3864_BRUME|1e-64|47.7|310/317| PROS 168->182|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 52->66|gegevlglvgesgcg| SEG 100->110|lrrvrrvvqlv| BL:PDB:NREP 1 BL:PDB:REP 37->272|3dhwC|4e-30|34.5|232/343| RP:PDB:NREP 1 RP:PDB:REP 41->270|3dmdC|6e-45|6.8|206/318| RP:PFM:NREP 2 RP:PFM:REP 111->196|PF00005|9e-11|43.4|83/123|ABC_tran| RP:PFM:REP 247->309|PF08352|3e-08|45.2|62/64|oligo_HPY| HM:PFM:NREP 3 HM:PFM:REP 68->196|PF00005|3.9e-21|33.3|117/118|ABC_tran| HM:PFM:REP 247->312|PF08352|2.3e-17|37.5|64/64|oligo_HPY| HM:PFM:REP 44->86|PF03193|0.00025|28.6|42/161|DUF258| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08352|IPR013563| GO:PFM GO:0005524|"GO:ATP binding"|PF08352|IPR013563| GO:PFM GO:0015833|"GO:peptide transport"|PF08352|IPR013563| RP:SCP:NREP 1 RP:SCP:REP 25->272|1b0uA|6e-41|26.2|240/258|c.37.1.12| HM:SCP:REP 52->317|1a7jA_|4.3e-69|41.8|244/0|c.37.1.6|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 30073 OP:NHOMOORG 1160 OP:PATTERN JJG9JDF9NOMMNLSGXEGFDDBIYEFXXHRICAA9BAGEFDAKMNLcJL*rb9MSLLMEJDE9J177 IRSB*NLLTTWEJCJMNHG-GQ66L*HHHHHFbTSUQwvxBhJlXodMWVPCbcZFGN33UaNQpSk*v*LPMMMZPOMHiMX8898AKKJC3E78B--77E7AAHAGDC6888888996AAAAAKJCHKECIHIFSWXgeAACeLROQYRQRPXKLE7C8DCJQLPqjhI5D65667D7676NGHDCda5JSYpqtntozzetvtpqz*nddgdytwRQa*lQRYXXXWX**KSSSRTQQRSSSSRRNNNNKZONLeeKHMNMXVGGacLKLKQUPTRYXXXXVYTYYVWUVUSSTUTURRRRQRRRRSRRRePOQPOQQQTQ*eqmknkpqrnQlSUmhhHNOKnTWaQsKQLC**XYORUcJNSRYM9UKE9OLKKEAAB9ATN***HCPteexVpurttovmnr*-WX*VTuRy**H6*************r9DDnv**v**ysyGFGGGGGGRJMAGLMp33344444332223553332232234353A99DB9o**ny******pmmni****tqtsXq*x*nlzg5FbaZeWbYard*q**NUSDOEEVHBBAAAABKHJLQKPZxGRLWZEScNMaCRLMKNNSOSIIHJXiOZDCDH6GGGHGD8977777779N8AABBfYgEfIOCKFeHHIIHCGKGFFHHIOHHMK4-6CMJI1--111sm**Rumgjighiihdf-jgfghhegdgjhedefddd*****TPUcbZaccccbcbacaab*caXccbdM1uz*z***xz***23ED99789FGFFFFnc*QQPOLPIKLKLNHMTHIIHI9JDILbMhgehl*y*hutkoW***898779889CRedhedeeddolmmGGJGGGGFGFB99934CHFFFEFG66576767T5MA9C97-C7ABDB9CCC8BA9B9555LOUIHckdcY8PG ----782-74-33564163245333352234447261222-222223456625323233333-2212122113333213233333312-4511---232232543216FAG4658893631484DB1I3JwC2C88323-9248645215653F1A54H6Cz1J743643PGPB68652V44447KFDg4OI56N9EB6 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 337 STR:RPRED 100.0 SQ:SECSTR HHHcccccccEEETTccccEEEEEEEEEEEccTTcTcccccccHHHHHHHccccEEEEEEccTTccHHHHHHHHHHHHHHTTccEEEEEEcTTTccHHHHHHHEEEEcccTcHHTcHHHHHHHHHHHHHTTcEEEcccTTTccHHHHHHHHHHHHHHHGTccEEEEEEcccccTTccHHHHHHHHHHHHcccEEEEEEETTcTTTHHHHHHHHHHHccccEEEEEcGGGccccHHHHHHHHHHTccEEEEEccccGGGEEEccHHHHHHHcccccTcccccTTcccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHTTccGGGcTTccHHHTTT DISOP:02AL 1-20, 275-286| PSIPRED ccccccccccccccccccccEEEEEcEEEEEEEcccccccEEEEccccEEEccccEEEEEEEccccHHHHHHHHHHcccccccEEEEccEEcccccHHHHHHHHHHcEEEEcccHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHcccccccccHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHHHHHHHccEEEEEccHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHccccccEEEEccccEEEEEEccccc //