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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87033.2
DDBJ      :             polysaccharide biosynthesis glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  662/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:517 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   180->314 1bxrA PDBj 6e-05 12.7 %
:RPS:PDB   375->430 2b0tA PDBj 9e-07 14.3 %
:RPS:SCOP  187->279 1zh8A1  c.2.1.3 * 8e-05 21.7 %
:HMM:SCOP  189->321 1xcbA2 c.2.1.12 * 1.5e-08 25.2 %
:RPS:PFM   323->512 PF02397 * Bac_transf 6e-48 56.2 %
:HMM:PFM   323->516 PF02397 * Bac_transf 3e-71 52.7 184/187  
:HMM:PFM   190->268 PF01408 * GFO_IDH_MocA 5.1e-05 26.3 76/120  
:HMM:PFM   129->169 PF00893 * Multi_Drug_Res 0.00098 22.0 41/93  
:BLT:SWISS 146->517 WCAJ_ECOLI 1e-63 39.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87033.2 GT:GENE AAK87033.2 GT:PRODUCT polysaccharide biosynthesis glycosyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1224313..1225866) GB:FROM 1224313 GB:TO 1225866 GB:DIRECTION - GB:PRODUCT polysaccharide biosynthesis glycosyltransferase GB:PROTEIN_ID AAK87033.2 GB:DB_XREF GI:159139972 LENGTH 517 SQ:AASEQ MTKTDKDRLQFDLASLRKKLSDYEAGGAAASETIVLNPLARQIANQLRAGNHSPNMVIGQLRLLEFTMLVIIAAVVNGIAADRGLETFLKVFSGGVLGAALCVFLLQAGDCYQLPTLRTPLKMFARIQGAVCLSFVGIACFLLVFFPETLQSWQAFAIWYATGAIAIFAGRLILGFAIRHWGRNGVMERRAVIVGGGDAARDLIRSLEQQSDNDIRICGIFDDRKSERSPEVVAGYPKLGTFAELVEFARLTKLDMLIIALPLSAEARILQLLRKLWVLPVDIRIAAHANKLRFRPRAYSHVGKVPMLDVFDKPIRDWDSVAKRLFDITFSLMGIALFWPVMLAAGIAVKATSKGPVLFKQKRHGFNNETINVWKFRSMYTELSDPTAKKAVTKNDPRVTPVGRFLRKSSMDELPQLFNVLYGDLSLVGPRPHAVHAQTGDLKYTEVVEHYFARHKVKPGVTGWAQINGWRGEIDHGDKIKFRTEYDLYYIENWSLFLDLKILFLTPIRLLKSENAY GT:EXON 1|1-517:0| BL:SWS:NREP 1 BL:SWS:REP 146->517|WCAJ_ECOLI|1e-63|39.3|359/464| TM:NTM 5 TM:REGION 57->79| TM:REGION 87->109| TM:REGION 129->151| TM:REGION 158->180| TM:REGION 326->348| SEG 70->81|viiaavvngiaa| RP:PDB:NREP 2 RP:PDB:REP 180->314|1bxrA|6e-05|12.7|134/1073| RP:PDB:REP 375->430|2b0tA|9e-07|14.3|56/735| RP:PFM:NREP 1 RP:PFM:REP 323->512|PF02397|6e-48|56.2|178/182|Bac_transf| HM:PFM:NREP 3 HM:PFM:REP 323->516|PF02397|3e-71|52.7|184/187|Bac_transf| HM:PFM:REP 190->268|PF01408|5.1e-05|26.3|76/120|GFO_IDH_MocA| HM:PFM:REP 129->169|PF00893|0.00098|22.0|41/93|Multi_Drug_Res| RP:SCP:NREP 1 RP:SCP:REP 187->279|1zh8A1|8e-05|21.7|92/181|c.2.1.3| HM:SCP:REP 189->321|1xcbA2|1.5e-08|25.2|123/0|c.2.1.12|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1328 OP:NHOMOORG 671 OP:PATTERN ------------------------2111-1--11---------------------------------- 254-11--111-1-1-1----2--11-----12333-3341232311-133-3221----22111-2122-12221-2-1613-11116454-922---22232232412--------------1---1211334-66677---414446442111111132223167772-2111--2-1111211122-1-21111121--1112212222212121111121------131222222222222222--1111-21222111231122121222---111----1--21222222221-------------111121111121-332222222223-1112332313211331122322-111111121121-33442-----223532132121311-11111111-43444744442-533366477744212112122233312--------222--123------------------------------3262-3111-5222451222222753333234483343-11-153121-42231223222211111111122232211312-33212332132312233333433323-2222111111---------2112221--122231312111111112----123112--12112------2113-121111111111-12111111111111111111112-21-2-21222222122211111-11111--------------------------12322111212--1111--1--11112111321-111232111111222222222222123322222223244--2111111111111-1-112233----------1-------------------------2221112111152 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 223 STR:RPRED 43.1 SQ:SECSTR ###################################################################################################################################################################################EEEEccccccTTccHHHHHHHHHHHHHH#HHTTcEEEEEEccTTccTTcTTTccEEEEccccHHHHHHHHHHHcccEEEccccTHHHHHHHHHHHHTTccEEcccHHHHHcHHHHHHHHHHTTcccccEEEEccHcccHHHHHHHHHHTcccccEEEEEEccTTcTTT###########################cEEEEcHHHHHHHHHHHHHTTcccEEEEcHHHHHHHHHHHHHHHHccccccEEEEE####################################################################################### DISOP:02AL 1-5,517-518| PSIPRED cccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHccccccEEEEEEEcccccccccEEccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEcccHHHHHcccccHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccEEEEEEEEccccEEEEEEEEcccccccccccccccccccccEEcHHHHHHHHcccHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccc //